RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 ACTR2P61160 394 aa21.02■□□□□ 0.96
CLDND1-203ENST00000394181 MAN2A1Q16706 1144 aa21.02■□□□□ 0.96
CLDND1-203ENST00000394181 GNPTABQ3T906 1256 aa21.02■□□□□ 0.96
CLDND1-203ENST00000394181 CCDC40Q4G0X9 1142 aa21.02■□□□□ 0.96
CLDND1-203ENST00000394181 RAD9BQ6WBX8 426 aa21.02■□□□□ 0.96
CLDND1-203ENST00000394181 FGD4Q96M96 766 aa21.02■□□□□ 0.96
CLDND1-203ENST00000394181 CEP63Q96MT8 703 aa21.02■□□□□ 0.96
CLDND1-203ENST00000394181 ABHD10Q9NUJ1 306 aa21.02■□□□□ 0.96
CLDND1-203ENST00000394181 AGPAT5Q9NUQ2 364 aa21.02■□□□□ 0.96
CLDND1-203ENST00000394181 ZMYM2Q9UBW7 1377 aa21.02■□□□□ 0.96
CLDND1-203ENST00000394181 STAM2O75886 525 aa21.02■□□□□ 0.95
CLDND1-203ENST00000394181 STBD1O95210 358 aa21.02■□□□□ 0.95
CLDND1-203ENST00000394181 TNNT1P13805 278 aa21.02■□□□□ 0.95
CLDND1-203ENST00000394181 EDRF1Q3B7T1 1238 aa21.02■□□□□ 0.95
CLDND1-203ENST00000394181 NYAP1Q6ZVC0 841 aa21.02■□□□□ 0.95
CLDND1-203ENST00000394181 CNGA4Q8IV77 575 aa21.02■□□□□ 0.95
CLDND1-203ENST00000394181 CCDC60Q8IWA6 550 aaPredicted RBP21.02■□□□□ 0.95
CLDND1-203ENST00000394181 FAM178BQ8IXR5 827 aa21.02■□□□□ 0.95
CLDND1-203ENST00000394181 DESI2Q9BSY9 194 aa21.02■□□□□ 0.95
CLDND1-203ENST00000394181 EDNRBP24530 442 aa21.01■□□□□ 0.95
CLDND1-203ENST00000394181 XKR9Q5GH70 373 aa21.01■□□□□ 0.95
CLDND1-203ENST00000394181 WDR78Q5VTH9 848 aa21.01■□□□□ 0.95
CLDND1-203ENST00000394181 CDHR1Q96JP9 859 aa21.01■□□□□ 0.95
CLDND1-203ENST00000394181 TTYH3Q9C0H2 523 aa21.01■□□□□ 0.95
CLDND1-203ENST00000394181 PORCNQ9H237 461 aa21.01■□□□□ 0.95
CLDND1-203ENST00000394181 NFASCO94856 1347 aa21.01■□□□□ 0.95
CLDND1-203ENST00000394181 PDXKO00764 312 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 SOCS7O14512 581 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 EPHB6O15197 1021 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 ABHD15Q6UXT9 468 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 SMCR8Q8TEV9 937 aaPredicted RBP21■□□□□ 0.95
CLDND1-203ENST00000394181 PCMTD1Q96MG8 357 aaPredicted RBP21■□□□□ 0.95
CLDND1-203ENST00000394181 ERGIC2Q96RQ1 377 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 SLC25A27O95847 323 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 ICAM3P32942 547 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 CASP4P49662 377 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 SOX10P56693 466 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 ERVK-24P63145 666 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 FKBP15Q5T1M5 1219 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 REXO1L1PQ8IX06 675 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 EFCC1Q9HA90 598 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 GBA2Q9HCG7 927 aaPredicted RBP21■□□□□ 0.95
CLDND1-203ENST00000394181 TYW1Q9NV66 732 aaKnown RBP21■□□□□ 0.95
CLDND1-203ENST00000394181 CAPN11Q9UMQ6 739 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 SIK3Q9Y2K2 1263 aa21■□□□□ 0.95
CLDND1-203ENST00000394181 CETN3O15182 167 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 CELF2O95319 508 aaKnown RBP20.99■□□□□ 0.95
CLDND1-203ENST00000394181 TPM1P09493 284 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 ERVK-9P63128 1117 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 TRIM14Q14142 442 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 PPP4R3CPQ6ZMV5 832 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 SMAP1Q8IYB5 467 aaPredicted RBP20.99■□□□□ 0.95
CLDND1-203ENST00000394181 RDM1Q8NG50 284 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 BRI3BPQ8WY22 251 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 SEL1LQ9UBV2 794 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 PPP2R2CQ9Y2T4 447 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 BTBD19C9JJ37 291 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 PDHXO00330 501 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 AKAP3O75969 853 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 NR3C1P04150 777 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 PSAPP07602 524 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 TRIM21P19474 475 aaKnown RBP20.99■□□□□ 0.95
CLDND1-203ENST00000394181 TRIM59Q8IWR1 403 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 CCDC43Q96MW1 224 aaKnown RBP20.99■□□□□ 0.95
CLDND1-203ENST00000394181 CHP1Q99653 195 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 STRA6Q9BX79 667 aa20.99■□□□□ 0.95
CLDND1-203ENST00000394181 PCNTO95613 3336 aa20.98■□□□□ 0.95
CLDND1-203ENST00000394181 A0A0U1RQJ8 604 aa20.98■□□□□ 0.95
CLDND1-203ENST00000394181 EIF3DO15371 548 aaKnown RBP eCLIP20.98■□□□□ 0.95
CLDND1-203ENST00000394181 KCNMA1Q12791 1236 aa20.98■□□□□ 0.95
CLDND1-203ENST00000394181 PTPN14Q15678 1187 aa20.98■□□□□ 0.95
CLDND1-203ENST00000394181 ATRIPQ8WXE1 791 aa20.98■□□□□ 0.95
CLDND1-203ENST00000394181 MMP19Q99542 508 aa20.98■□□□□ 0.95
CLDND1-203ENST00000394181 NMRK2Q9NPI5 230 aa20.98■□□□□ 0.95
CLDND1-203ENST00000394181 FAM207AQ9NSI2 230 aaPredicted RBP20.98■□□□□ 0.95
CLDND1-203ENST00000394181 ANKEF1Q9NU02 776 aa20.98■□□□□ 0.95
CLDND1-203ENST00000394181 LUC7L2Q9Y383 392 aaKnown RBP20.98■□□□□ 0.95
CLDND1-203ENST00000394181 DNAJC25-GNG10A0A024R161 153 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 CCL15-CCL14A0A0B4J2E2 113 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 CALUO43852 315 aaPredicted RBP20.97■□□□□ 0.95
CLDND1-203ENST00000394181 UBA1P22314 1058 aaKnown RBP20.97■□□□□ 0.95
CLDND1-203ENST00000394181 FECHP22830 423 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 MARSP56192 900 aaKnown RBP20.97■□□□□ 0.95
CLDND1-203ENST00000394181 CCL15Q16663 113 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 CCDC51Q96ER9 411 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 PPP1R37O75864 691 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 ATP4AP20648 1035 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 APBA1Q02410 837 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 LY6KQ17RY6 165 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 FAM102BQ5T8I3 360 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 WDR59Q6PJI9 974 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 ZNF592Q92610 1267 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 CEP170P1Q96L14 293 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 SYNGAP1Q96PV0 1343 aa20.97■□□□□ 0.95
CLDND1-203ENST00000394181 TISP43B9A030 160 aa20.96■□□□□ 0.95
CLDND1-203ENST00000394181 K7ENM7 598 aa20.96■□□□□ 0.95
CLDND1-203ENST00000394181 ARIH2O95376 493 aa20.96■□□□□ 0.95
CLDND1-203ENST00000394181 GNA14O95837 355 aa20.96■□□□□ 0.95
CLDND1-203ENST00000394181 SUPT20HL2P0C7V6 817 aa20.96■□□□□ 0.95
CLDND1-203ENST00000394181 PLS3P13797 630 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms