RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 ZKSCAN4Q969J2 545 aaPredicted RBP9.29□□□□□ -0.92
GABRA1-202ENST00000393943 LRRC37BQ96QE4 947 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 ERP44Q9BS26 406 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 VPS37BQ9H9H4 285 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 FAM217BQ9NTX9 383 aaPredicted RBP9.29□□□□□ -0.92
GABRA1-202ENST00000393943 BSDC1Q9NW68 430 aaPredicted RBP9.29□□□□□ -0.92
GABRA1-202ENST00000393943 TNS3Q68CZ2 1445 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 BRD2P25440 801 aaKnown RBP9.29□□□□□ -0.92
GABRA1-202ENST00000393943 STK4Q13043 487 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 STAT4Q14765 748 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 SEC23AQ15436 765 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 FUKQ8N0W3 1084 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 TGFBRAP1Q8WUH2 860 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 TSNARE1Q96NA8 513 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 SEL1LQ9UBV2 794 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 FAM205CA6NFA0 338 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 ABCD1P33897 745 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 DYNLL1P63167 89 aaKnown RBP9.29□□□□□ -0.92
GABRA1-202ENST00000393943 OLFM3Q96PB7 478 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 TMEM206Q9H813 350 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 SENP2Q9HC62 589 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 DDX20Q9UHI6 824 aaKnown RBP9.29□□□□□ -0.92
GABRA1-202ENST00000393943 AMACRQ9UHK6 382 aa9.29□□□□□ -0.92
GABRA1-202ENST00000393943 TMEM253P0C7T8 217 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 GPC5P78333 572 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 MRPS25P82663 173 aaKnown RBP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 KNOP1Q1ED39 458 aaKnown RBP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 RPUSD2Q8IZ73 545 aaKnown RBP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 OGFOD1Q8N543 542 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 MS4A14Q96JA4 679 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 DCP1AQ9NPI6 582 aaPredicted RBP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 ARHGAP20Q9P2F6 1191 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 SNX24Q9Y343 169 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 PNMA6FA0A0J9YX94 578 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 FCER1AP12319 257 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 RBM5P52756 815 aaKnown RBP eCLIP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 COPS2P61201 443 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 PGM2Q96G03 612 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 CCDC17Q96LX7 622 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 SERPINB12Q96P63 405 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 SMG5Q9UPR3 1016 aaKnown RBP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 LEMD3Q9Y2U8 911 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 NALCNQ8IZF0 1738 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 TSPOAP1O95153 1857 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 ATP6V1G2O95670 118 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 NQO1P15559 274 aaKnown RBP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 KLC1Q07866 573 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 TRPC3Q13507 836 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 TTMPQ5BVD1 217 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 KLHDC7AQ5VTJ3 777 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 APBB1IPQ7Z5R6 666 aaPredicted RBP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 RNF168Q8IYW5 571 aaPredicted RBP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 MIEF2Q96C03 454 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 PURBQ96QR8 312 aaKnown RBP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 TLR10Q9BXR5 811 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 MIS12Q9H081 205 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 ETNK1Q9HBU6 452 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 RAB20Q9NX57 234 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 SAP30BPQ9UHR5 308 aaKnown RBP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 AXIN2Q9Y2T1 843 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 PCDHGC5Q9Y5F6 944 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 CCDC160A6NGH7 325 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 H0YCG3 227 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 KLRC1P26715 233 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 MESDQ14696 234 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 TMEM132AQ24JP5 1023 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 GPIHBP1Q8IV16 184 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 ST13P4Q8IZP2 240 aaPredicted RBP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 PIP4K2CQ8TBX8 421 aa9.28□□□□□ -0.92
GABRA1-202ENST00000393943 TGS1Q96RS0 853 aaKnown RBP9.28□□□□□ -0.92
GABRA1-202ENST00000393943 PHF20L1A8MW92 1017 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 LIN7AO14910 233 aaPredicted RBP9.27□□□□□ -0.93
GABRA1-202ENST00000393943 C21orf2O43822 256 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 CDH16O75309 829 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 TTLL1O95922 423 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 GSTA2P09210 222 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 KRT5P13647 590 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 ITGB3BPQ13352 177 aaPredicted RBP9.27□□□□□ -0.93
GABRA1-202ENST00000393943 NME8Q8N427 588 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 NSMCE1Q8WV22 266 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 STAMBPL1Q96FJ0 436 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 SLC24A3Q9HC58 644 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 C6orf229H3BNL8 230 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 BRAFP15056 766 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 ITIH2P19823 946 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 SOX5P35711 763 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 MAPKAPK5Q8IW41 473 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 IQCKQ8N0W5 287 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 OSBPL1AQ9BXW6 950 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 AIPL1Q9NZN9 384 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.27□□□□□ -0.93
GABRA1-202ENST00000393943 EXOC1LA0A1B0GW35 172 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 NR3C1P04150 777 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 GLI1P08151 1106 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 GSCP56915 257 aaPredicted RBP9.27□□□□□ -0.93
GABRA1-202ENST00000393943 MECOMQ03112 1051 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 RIPK1Q13546 671 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 PKN1Q16512 942 aa9.27□□□□□ -0.93
GABRA1-202ENST00000393943 ATXN2LQ8WWM7 1075 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms