RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 CD2APQ9Y5K6 639 aa15.7■□□□□ 0.1
MKS1-203ENST00000393120 ZMYM2Q9UBW7 1377 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 MACROD2A1Z1Q3 448 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 ARHGEF35A5YM69 484 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 SFI1A8K8P3 1242 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 ENC1O14682 589 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 MAPTP10636 758 aaKnown RBP15.69■□□□□ 0.1
MKS1-203ENST00000393120 NMT1P30419 496 aaKnown RBP15.69■□□□□ 0.1
MKS1-203ENST00000393120 MRPS9P82933 396 aaKnown RBP15.69■□□□□ 0.1
MKS1-203ENST00000393120 CKAP4Q07065 602 aaKnown RBP15.69■□□□□ 0.1
MKS1-203ENST00000393120 KCNA1Q09470 495 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 MYBPC2Q14324 1141 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 KLHDC7AQ5VTJ3 777 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 XRRA1Q6P2D8 792 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 IL31RAQ8NI17 732 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 TMEM174Q8WUU8 243 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 BCAS3Q9H6U6 928 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 DMAC2Q9NW81 257 aa15.69■□□□□ 0.1
MKS1-203ENST00000393120 SCAF8Q9UPN6 1271 aaKnown RBP15.69■□□□□ 0.1
MKS1-203ENST00000393120 BZW2Q9Y6E2 419 aaKnown RBP15.69■□□□□ 0.1
MKS1-203ENST00000393120 RBBP6Q7Z6E9 1792 aaKnown RBP15.69■□□□□ 0.1
MKS1-203ENST00000393120 BRCA1P38398 1863 aaKnown RBP15.69■□□□□ 0.1
MKS1-203ENST00000393120 PON1P27169 355 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 ANXA13P27216 316 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 PSMC2P35998 433 aaKnown RBP15.68■□□□□ 0.1
MKS1-203ENST00000393120 MTMR2Q13614 643 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 EXOC3L4Q17RC7 722 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 MUM1L1Q5H9M0 696 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 GBP6Q6ZN66 633 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 SAMD7Q7Z3H4 446 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 FAM178BQ8IXR5 827 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 CPXCR1Q8N123 301 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 ZFP91Q96JP5 570 aaPredicted RBP15.68■□□□□ 0.1
MKS1-203ENST00000393120 RPAP3Q9H6T3 665 aaPredicted RBP15.68■□□□□ 0.1
MKS1-203ENST00000393120 HDAC6Q9UBN7 1215 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 PPP1R37O75864 691 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 UCHL3P15374 230 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 BACE1P56817 501 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 GFPT1Q06210 699 aaPredicted RBP15.68■□□□□ 0.1
MKS1-203ENST00000393120 MAPK7Q13164 816 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 ITGB3BPQ13352 177 aaPredicted RBP15.68■□□□□ 0.1
MKS1-203ENST00000393120 ALCAMQ13740 583 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 SLC18A3Q16572 532 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 TDRD12Q587J7 1177 aaKnown RBP15.68■□□□□ 0.1
MKS1-203ENST00000393120 ODR4Q5SWX8 454 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 C10orf76Q5T2E6 689 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 NBPF12Q5TAG4 269 aaPredicted RBP15.68■□□□□ 0.1
MKS1-203ENST00000393120 HS2ST1Q7LGA3 356 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 SLC9A9Q8IVB4 645 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 SCYL3Q8IZE3 742 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 BANK1Q8NDB2 785 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 ALS2CR12Q96Q35 445 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 MAF1Q9H063 256 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 AS3MTQ9HBK9 375 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 POLD4Q9HCU8 107 aa15.68■□□□□ 0.1
MKS1-203ENST00000393120 VWA5AO00534 786 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 PPP1R12BO60237 982 aaPredicted RBP15.67■□□□□ 0.1
MKS1-203ENST00000393120 TBC1D8O95759 1140 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 TFRCP02786 760 aaKnown RBP15.67■□□□□ 0.1
MKS1-203ENST00000393120 SLC9A1P19634 815 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 CASP4P49662 377 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 OAZ1P54368 228 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 RPS6P62753 249 aaKnown RBP15.67■□□□□ 0.1
MKS1-203ENST00000393120 MTMR1Q13613 665 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 PGM5Q15124 567 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 ASIC2Q16515 512 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 TBC1D10BQ4KMP7 808 aaPredicted RBP15.67■□□□□ 0.1
MKS1-203ENST00000393120 ZC2HC1CQ53FD0 456 aaPredicted RBP15.67■□□□□ 0.1
MKS1-203ENST00000393120 PADI6Q6TGC4 694 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 C12orf42Q96LP6 360 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 TAAR1Q96RJ0 339 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 TIPINQ9BVW5 301 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 GBP3Q9H0R5 595 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 SNX12Q9UMY4 172 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 CTDP1Q9Y5B0 961 aaPredicted RBP15.67■□□□□ 0.1
MKS1-203ENST00000393120 ZHX2Q9Y6X8 837 aa15.67■□□□□ 0.1
MKS1-203ENST00000393120 ASTN2O75129 1339 aaPredicted RBP15.67■□□□□ 0.1
MKS1-203ENST00000393120 CLIC2O15247 247 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 HIP1RO75146 1068 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 QARSP47897 775 aaKnown RBP15.66■□□□□ 0.1
MKS1-203ENST00000393120 APBA1Q02410 837 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 ITIH3Q06033 890 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 KLHL30Q0D2K2 578 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 SPP2Q13103 211 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 RAPGEF1Q13905 1077 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 WDR93Q6P2C0 686 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 ZNF572Q7Z3I7 529 aaPredicted RBP15.66■□□□□ 0.1
MKS1-203ENST00000393120 IRF2BP2Q7Z5L9 587 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 FAM186BQ8IYM0 893 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 DAW1Q8N136 415 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 NOX5Q96PH1 765 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 TRERF1Q96PN7 1200 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 AGPAT3Q9NRZ7 376 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 ADAMTS5Q9UNA0 930 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 CAPN6Q9Y6Q1 641 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 ERLIN1O75477 346 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 PTPRAP18433 802 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 PRKCIP41743 596 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 PPP2R5AQ15172 486 aa15.66■□□□□ 0.1
MKS1-203ENST00000393120 RNF207Q6ZRF8 634 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms