RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 C9IYK1 514 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 PIP5K1BO14986 540 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 HNRNPCP07910 306 aaKnown RBP eCLIP3.97□□□□□ -1.77
XRN1-202ENST00000392981 GSTP1P09211 210 aaKnown RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 HOXB3P14651 431 aaPredicted RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 GCH1P30793 250 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 PER3P56645 1201 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 NLRP12P59046 1061 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 PAK1Q13153 545 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 UGT8Q16880 541 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 GTF2IRD2BQ6EKJ0 949 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ATF7IPQ6VMQ6 1270 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 MFSD6Q6ZSS7 791 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 RRAGAQ7L523 313 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 MAMDC2Q7Z304 686 aaPredicted RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 RSPH3Q86UC2 560 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 GTF2IRD2Q86UP8 949 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ARL6IP6Q8N6S5 226 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 TMEM145Q8NBT3 493 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 GABPB2Q8TAK5 448 aaPredicted RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 SNRNP27Q8WVK2 155 aaKnown RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 SCLYQ96I15 445 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 COG8Q96MW5 612 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 KCTD10Q9H3F6 313 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 SMOC1Q9H4F8 434 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 VEZTQ9HBM0 779 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 KCND1Q9NSA2 647 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 CPSF2Q9P2I0 782 aaKnown RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 PCDHB12Q9Y5F1 795 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 RASSF9O75901 435 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 NR3C2P08235 984 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 PDHA1P08559 390 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ACRP10323 421 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 SMAD2Q15796 467 aaKnown RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 BMP2KLQ5H9B9 411 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 CCDC73Q6ZRK6 1079 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 SRBD1Q8N5C6 995 aaKnown RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 ZBTB8BQ8NAP8 495 aaPredicted RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 TRAPPC12Q8WVT3 735 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 OSBPL5Q9H0X9 879 aaPredicted RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 IL21Q9HBE4 155 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ATP6V0A4Q9HBG4 840 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ZNF214Q9UL59 606 aaPredicted RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 SNCAIPQ9Y6H5 919 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 LOC102724428A0A0B4J2F2 783 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 MTSS1O43312 755 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ZNF862O60290 1169 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 SLFN14P0C7P3 912 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ATP4AP20648 1035 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ECE1P42892 770 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 AFMP43652 599 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ALDH5A1P51649 535 aaPredicted RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 SIK1P57059 783 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 C1orf141Q5JVX7 400 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 GPATCH4Q5T3I0 446 aaKnown RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 IER5Q5VY09 327 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 IZUMO3Q5VZ72 239 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 C1orf122Q6ZSJ8 110 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 NKAPQ8N5F7 415 aaKnown RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 CEP120Q8N960 986 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 UTP15Q8TED0 518 aaKnown RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 SIPA1Q96FS4 1042 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 NT5C1BQ96P26 610 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 CGRRF1Q99675 332 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 SMARCAD1Q9H4L7 1026 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 CCDC177Q9NQR7 707 aaPredicted RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 PRDM5Q9NQX1 630 aaPredicted RBP3.97□□□□□ -1.77
XRN1-202ENST00000392981 TAB2Q9NYJ8 693 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 TBK1Q9UHD2 729 aa3.97□□□□□ -1.77
XRN1-202ENST00000392981 ADAMTS3O15072 1205 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 DLX3O60479 287 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 COBLO75128 1261 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 RGS20O76081 388 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 GNAT1P11488 350 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 PIP4K2BP78356 416 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 POU4F3Q15319 338 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 TTC31Q49AM3 519 aaPredicted RBP3.96□□□□□ -1.77
XRN1-202ENST00000392981 TMEM177Q53S58 311 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 RASIP1Q5U651 963 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 B4GALNT4Q76KP1 1039 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 DHX32Q7L7V1 743 aaKnown RBP3.96□□□□□ -1.77
XRN1-202ENST00000392981 NLRP14Q86W24 1093 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 CEP97Q8IW35 865 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 RHOT1Q8IXI2 618 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 NEK11Q8NG66 645 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 ZFPM2Q8WW38 1151 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 JADE3Q92613 823 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 MARVELD3Q96A59 401 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 ARL8AQ96BM9 186 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 AGO4Q9HCK5 861 aaKnown RBP3.96□□□□□ -1.77
XRN1-202ENST00000392981 GPRC5CQ9NQ84 441 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 ACAD8Q9UKU7 415 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 SLC39A10Q9ULF5 831 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 MAFFQ9ULX9 164 aa3.96□□□□□ -1.77
XRN1-202ENST00000392981 PTGES3LE9PB15 166 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 ARIH2O95376 493 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 NFKBIAP25963 317 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 MBTPS1Q14703 1052 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 SULT6B1Q6IMI4 303 aa3.96□□□□□ -1.78
XRN1-202ENST00000392981 LRFN4Q6PJG9 635 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms