RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 KCNMA1Q12791 1236 aa22.08■■□□□ 1.13
PTPN11-202ENST00000392597 NLRX1Q86UT6 975 aa22.08■■□□□ 1.13
PTPN11-202ENST00000392597 FAM178BQ8IXR5 827 aa22.08■■□□□ 1.13
PTPN11-202ENST00000392597 NHEJ1Q9H9Q4 299 aaPredicted RBP22.08■■□□□ 1.13
PTPN11-202ENST00000392597 CEP72Q9P209 647 aa22.08■■□□□ 1.13
PTPN11-202ENST00000392597 REXO2Q9Y3B8 237 aaKnown RBP22.08■■□□□ 1.13
PTPN11-202ENST00000392597 SAMM50Q9Y512 469 aa22.08■■□□□ 1.13
PTPN11-202ENST00000392597 SFI1A8K8P3 1242 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 WDR64B1ANS9 1081 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 EPHB6O15197 1021 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 STAM2O75886 525 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 IPO7O95373 1038 aaKnown RBP22.07■■□□□ 1.12
PTPN11-202ENST00000392597 MAPTP10636 758 aaKnown RBP22.07■■□□□ 1.12
PTPN11-202ENST00000392597 PADI6Q6TGC4 694 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 C4orf19Q8IY42 314 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 BAP1Q92560 729 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 CDCA5Q96FF9 252 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 INPP4AQ96PE3 977 aaPredicted RBP22.07■■□□□ 1.12
PTPN11-202ENST00000392597 SENP7Q9BQF6 1050 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 TIPINQ9BVW5 301 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 HAUS4Q9H6D7 363 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 PCDHB13Q9Y5F0 798 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 ZMYM2Q9UBW7 1377 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 PPP1R12BO60237 982 aaPredicted RBP22.07■■□□□ 1.12
PTPN11-202ENST00000392597 TOMM70O94826 608 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 MAPK7Q13164 816 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 ODR4Q5SWX8 454 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 SMCR8Q8TEV9 937 aaPredicted RBP22.07■■□□□ 1.12
PTPN11-202ENST00000392597 SYN2Q92777 582 aaPredicted RBP22.07■■□□□ 1.12
PTPN11-202ENST00000392597 CYP39A1Q9NYL5 469 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 CSADQ9Y600 493 aa22.07■■□□□ 1.12
PTPN11-202ENST00000392597 A0A0U1RQJ8 604 aa22.06■■□□□ 1.12
PTPN11-202ENST00000392597 TESPA1A2RU30 521 aaPredicted RBP22.06■■□□□ 1.12
PTPN11-202ENST00000392597 TGFB1I1O43294 461 aa22.06■■□□□ 1.12
PTPN11-202ENST00000392597 EPB41P11171 864 aaKnown RBP22.06■■□□□ 1.12
PTPN11-202ENST00000392597 NMT1P30419 496 aaKnown RBP22.06■■□□□ 1.12
PTPN11-202ENST00000392597 RARRES1P49788 294 aa22.06■■□□□ 1.12
PTPN11-202ENST00000392597 ALCAMQ13740 583 aa22.06■■□□□ 1.12
PTPN11-202ENST00000392597 TUBB2AQ13885 445 aa22.06■■□□□ 1.12
PTPN11-202ENST00000392597 ZNF746Q6NUN9 644 aaPredicted RBP22.06■■□□□ 1.12
PTPN11-202ENST00000392597 DLK2Q6UY11 383 aa22.06■■□□□ 1.12
PTPN11-202ENST00000392597 GOLGA5Q8TBA6 731 aa22.06■■□□□ 1.12
PTPN11-202ENST00000392597 ATRIPQ8WXE1 791 aa22.06■■□□□ 1.12
PTPN11-202ENST00000392597 CDHR1Q96JP9 859 aa22.06■■□□□ 1.12
PTPN11-202ENST00000392597 TUBB2BQ9BVA1 445 aa22.06■■□□□ 1.12
PTPN11-202ENST00000392597 BCAS3Q9H6U6 928 aa22.06■■□□□ 1.12
PTPN11-202ENST00000392597 OTOFQ9HC10 1997 aa22.06■■□□□ 1.12
PTPN11-202ENST00000392597 HIP1RO75146 1068 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 ERCC3P19447 782 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 NF2P35240 595 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 PSMC5P62195 406 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 KCNH2Q12809 1159 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 PDXDC1Q6P996 788 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 CACNA2D4Q7Z3S7 1137 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 DAW1Q8N136 415 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 SMC1BQ8NDV3 1235 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 MKNK1Q9BUB5 465 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 STRA6Q9BX79 667 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 IRX2Q9BZI1 471 aaPredicted RBP22.05■■□□□ 1.12
PTPN11-202ENST00000392597 A1CFQ9NQ94 594 aaKnown RBP22.05■■□□□ 1.12
PTPN11-202ENST00000392597 ATP9AO75110 1047 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 PPP1R37O75864 691 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 AKAP3O75969 853 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 ITGBL1O95965 494 aaPredicted RBP22.05■■□□□ 1.12
PTPN11-202ENST00000392597 PRKG1Q13976 671 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 ZNF569Q5MCW4 686 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 RRAGAQ7L523 313 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 HS2ST1Q7LGA3 356 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 CHST13Q8NET6 341 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 CCDC42Q96M95 316 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 PURBQ96QR8 312 aaKnown RBP22.05■■□□□ 1.12
PTPN11-202ENST00000392597 POLD4Q9HCU8 107 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 ANKEF1Q9NU02 776 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 LARSQ9P2J5 1176 aaKnown RBP22.05■■□□□ 1.12
PTPN11-202ENST00000392597 MRFAP1Q9Y605 127 aa22.05■■□□□ 1.12
PTPN11-202ENST00000392597 A0A0G2JMZ2 1700 aa22.04■■□□□ 1.12
PTPN11-202ENST00000392597 NOL4O94818 638 aa22.04■■□□□ 1.12
PTPN11-202ENST00000392597 AFPP02771 609 aaKnown RBP22.04■■□□□ 1.12
PTPN11-202ENST00000392597 XRCC5P13010 732 aaKnown RBP22.04■■□□□ 1.12
PTPN11-202ENST00000392597 YWHABP31946 246 aaKnown RBP22.04■■□□□ 1.12
PTPN11-202ENST00000392597 HERVK_113P62684 666 aa22.04■■□□□ 1.12
PTPN11-202ENST00000392597 KCNA1Q09470 495 aa22.04■■□□□ 1.12
PTPN11-202ENST00000392597 CCDC155Q8N6L0 562 aa22.04■■□□□ 1.12
PTPN11-202ENST00000392597 KIAA1217Q5T5P2 1943 aa22.03■■□□□ 1.12
PTPN11-202ENST00000392597 LRRC53A6NM62 1247 aa22.03■■□□□ 1.12
PTPN11-202ENST00000392597 RRP9O43818 475 aaKnown RBP22.03■■□□□ 1.12
PTPN11-202ENST00000392597 CCNE2O96020 404 aa22.03■■□□□ 1.12
PTPN11-202ENST00000392597 IREB2P48200 963 aaKnown RBP22.03■■□□□ 1.12
PTPN11-202ENST00000392597 MYBPC2Q14324 1141 aa22.03■■□□□ 1.12
PTPN11-202ENST00000392597 EHBP1Q8NDI1 1231 aa22.03■■□□□ 1.12
PTPN11-202ENST00000392597 LSM14BQ9BX40 385 aaKnown RBP22.03■■□□□ 1.12
PTPN11-202ENST00000392597 GBP3Q9H0R5 595 aa22.03■■□□□ 1.12
PTPN11-202ENST00000392597 NFASCO94856 1347 aa22.03■■□□□ 1.12
PTPN11-202ENST00000392597 LCA5LO95447 670 aa22.03■■□□□ 1.12
PTPN11-202ENST00000392597 ZC2HC1CQ53FD0 456 aaPredicted RBP22.03■■□□□ 1.12
PTPN11-202ENST00000392597 SMAP1Q8IYB5 467 aaPredicted RBP22.03■■□□□ 1.12
PTPN11-202ENST00000392597 TMEM174Q8WUU8 243 aa22.03■■□□□ 1.12
PTPN11-202ENST00000392597 IWS1Q96ST2 819 aa22.03■■□□□ 1.12
PTPN11-202ENST00000392597 MOV10L1Q9BXT6 1211 aaKnown RBP22.03■■□□□ 1.12
PTPN11-202ENST00000392597 PLCB1Q9NQ66 1216 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms