RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 MTIF3Q9H2K0 278 aaKnown RBP16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 TUFT1Q9NNX1 390 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 PPME1Q9Y570 386 aa16.84■□□□□ 0.29
IGHV3-53-201ENST00000390627 SLITRK3O94933 977 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 LYPLA2O95372 231 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 ACRP10323 421 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 TMOD1P28289 359 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 YWHABP31946 246 aaKnown RBP16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 PDIA5Q14554 519 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 TARBP2Q15633 366 aaKnown RBP16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 FAM26DQ5JW98 314 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 TMEM240Q5SV17 173 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 IER5Q5VY09 327 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 ANO5Q75V66 913 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 NME8Q8N427 588 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 METTL13Q8N6R0 699 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 IGSF22Q8N9C0 903 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 JPH2Q9BR39 696 aaPredicted RBP16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 FTOQ9C0B1 505 aaKnown RBP eCLIP16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 WRAP73Q9P2S5 460 aaPredicted RBP16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 LRWD1Q9UFC0 647 aa16.83■□□□□ 0.28
IGHV3-53-201ENST00000390627 FGBP02675 491 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 CXCL10P02778 98 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 ACTN1P12814 892 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 MUTP22033 750 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 MRPS6P82932 125 aaKnown RBP16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 SF3A1Q15459 793 aaKnown RBP16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 SHHQ15465 462 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 C9orf50Q5SZB4 431 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 PLA2G4FQ68DD2 849 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 ZNF365Q70YC5 407 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 EXOC8Q8IYI6 725 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 CEP170P1Q96L14 293 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 RNPC3Q96LT9 517 aaKnown RBP16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 CCDC43Q96MW1 224 aaKnown RBP16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 MAP7D2Q96T17 732 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 POLR3CQ9BUI4 534 aaPredicted RBP16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 CYP26B1Q9NR63 512 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 CDY2AQ9Y6F7 541 aa16.82■□□□□ 0.28
IGHV3-53-201ENST00000390627 SCN5AQ14524 2016 aa16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 TMEM150BA6NC51 233 aa16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 NBNO60934 754 aa16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 ZSCAN22P10073 491 aaPredicted RBP16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 RPA1P27694 616 aa16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 MGAT3Q09327 533 aa16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 EFCAB12Q6NXP0 572 aa16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 C16orf59Q7L2K0 433 aa16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 CATSPER3Q86XQ3 398 aa16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 ZNF710Q8N1W2 664 aa16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 HERVK_113Q902F9 699 aa16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 ANKEF1Q9NU02 776 aa16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 TRPV2Q9Y5S1 764 aa16.81■□□□□ 0.28
IGHV3-53-201ENST00000390627 MED24O75448 989 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 CHRNA1P02708 482 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 SPATA31C1P0DKV0 1188 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 XRCC6P12956 609 aaKnown RBP eCLIP16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 CCT6AP40227 531 aaKnown RBP16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 RFC5P40937 340 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 CLCN3P51790 818 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 POLGP54098 1239 aaPredicted RBP16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 MBTPS1Q14703 1052 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 GPNMBQ14956 572 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 XKR9Q5GH70 373 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 HABP4Q5JVS0 413 aaKnown RBP16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 KRT79Q5XKE5 535 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 FAM173BQ6P4H8 233 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 CNKSR3Q6P9H4 555 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 KIAA0319LQ8IZA0 1049 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 LINC01465Q8N7H1 131 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 SNX29Q8TEQ0 813 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 SLC7A3Q8WY07 619 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 VWCEQ96DN2 955 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 CEP89Q96ST8 783 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 SUGCTQ9HAC7 445 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 AKT3Q9Y243 479 aa16.8■□□□□ 0.28
IGHV3-53-201ENST00000390627 KDM3AQ9Y4C1 1321 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 VWA3AA6NCI4 1184 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 GAS2O43903 313 aaKnown RBP16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 BAIAP3O94812 1187 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 F13A1P00488 732 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 DNM2P50570 870 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 NPEPPSP55786 919 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 TMEM62Q0P6H9 643 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 IL17AQ16552 155 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 FOXD4L5Q5VV16 416 aaPredicted RBP16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 OTOP2Q7RTS6 562 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 LRRC71Q8N4P6 559 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 USP38Q8NB14 1042 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 FOXD4L4Q8WXT5 416 aaPredicted RBP16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 SEPT8Q92599 483 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 AK8Q96MA6 479 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 ZNF396Q96N95 335 aaPredicted RBP16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 NACC1Q96RE7 527 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 SH2D3AQ9BRG2 576 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 CELF4Q9BZC1 486 aaKnown RBP16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 CLIC4Q9Y696 253 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 SQORQ9Y6N5 450 aa16.79■□□□□ 0.28
IGHV3-53-201ENST00000390627 IGKV6-21A0A0C4DH24 114 aa16.78■□□□□ 0.28
IGHV3-53-201ENST00000390627 ZBBXA8MT70 800 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms