RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 NAP1L4Q99733 375 aaKnown RBP12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 AGO3Q9H9G7 860 aaKnown RBP12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 SLC28A3Q9HAS3 691 aa12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 TCEAL9Q9UHQ7 104 aa12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 ARID2Q68CP9 1835 aa12.85□□□□□ -0.35
IGHV4-28-201ENST00000390612 SPTBN5Q9NRC6 3674 aaKnown RBP12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 VCANP13611 3396 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 WNT7AO00755 349 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 CCNT1O60563 726 aaKnown RBP12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 CD2BP2O95400 341 aaKnown RBP12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 CA3P07451 260 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 GHRP10912 638 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 HMGN5P82970 282 aaKnown RBP12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 HTRA4P83105 476 aaPredicted RBP12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 TAP1Q03518 808 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 SPIRE1Q08AE8 756 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 IER5Q5VY09 327 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 MIER3Q7Z3K6 550 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 TMCO2Q7Z6W1 182 aaPredicted RBP12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 USP38Q8NB14 1042 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 FBXO18Q8NFZ0 1043 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 TOP1MTQ969P6 601 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 RAD9AQ99638 391 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 NIFKQ9BYG3 293 aaKnown RBP12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 IFIH1Q9BYX4 1025 aaKnown RBP12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 CELF4Q9BZC1 486 aaKnown RBP12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 FAM49AQ9H0Q0 323 aaPredicted RBP12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 BRMS1Q9HCU9 246 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 SAMM50Q9Y512 469 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 TRPV2Q9Y5S1 764 aa12.84□□□□□ -0.35
IGHV4-28-201ENST00000390612 COL4A6Q14031 1691 aa12.83□□□□□ -0.35
IGHV4-28-201ENST00000390612 RALGAPA2Q2PPJ7 1873 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 KIF28PB7ZC32 967 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 MAGEB2O15479 319 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 CHMP2AO43633 222 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 OATP04181 439 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 PRKCEQ02156 737 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 TRIM29Q14134 588 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 TSHZ1Q6ZSZ6 1077 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 FAM43BQ6ZT52 329 aaPredicted RBP12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 POTEDQ86YR6 584 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 CKAP2LQ8IYA6 745 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 CRIPAKQ8N1N5 446 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 MTMR9Q96QG7 549 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 CDHR5Q9HBB8 845 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 NRBP2Q9NSY0 501 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 CEP131Q9UPN4 1083 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 TTC28Q96AY4 2481 aa12.83□□□□□ -0.36
IGHV4-28-201ENST00000390612 FNDC1Q4ZHG4 1894 aaPredicted RBP12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 IGKV6-21A0A0C4DH24 114 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 LCHNA4D1U4 455 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 ENPP3O14638 875 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 TLL1O43897 1013 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 GPR32O75388 356 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 AMHP03971 560 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 POU3F3P20264 500 aaPredicted RBP12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 GUCY1B3Q02153 619 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 TMEM62Q0P6H9 643 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 ADGRE1Q14246 886 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 XKR3Q5GH77 459 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 PPP2R2DQ66LE6 453 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 RTN4RL1Q86UN2 441 aaPredicted RBP12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 SLFN12Q8IYM2 578 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 LINC01599Q8WXQ3 324 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 C8orf76Q96K31 380 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 BACH2Q9BYV9 841 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 FOXP1Q9H334 677 aaPredicted RBP12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 PRDM12Q9H4Q4 367 aa12.82□□□□□ -0.36
IGHV4-28-201ENST00000390612 ST18O60284 1047 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 P4HBP07237 508 aaKnown RBP12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 CD52P31358 61 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 FOSBP53539 338 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 PSMC5P62195 406 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 EPHA7Q15375 998 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 ANO5Q75V66 913 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 SPRED2Q7Z698 418 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 ZNF710Q8N1W2 664 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 TMX3Q96JJ7 454 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 TMX1Q9H3N1 280 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 UPF2Q9HAU5 1272 aaKnown RBP12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 ERVK-5Q9HDB9 667 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 WRAP73Q9P2S5 460 aaPredicted RBP12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 PADI3Q9ULW8 664 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 INSL6Q9Y581 213 aa12.81□□□□□ -0.36
IGHV4-28-201ENST00000390612 XIRP2A4UGR9 3374 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 LINC01553A4QN01 128 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 EPOPA6NHQ4 379 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 M0QZ92 97 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 FOSL2P15408 326 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 U2AF2P26368 475 aaKnown RBP eCLIP12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 QARSP47897 775 aaKnown RBP12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 CRYBB1P53674 252 aaPredicted RBP12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 SAFBQ15424 915 aaKnown RBP eCLIP12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 EFCAB12Q6NXP0 572 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 TRMT1LQ7Z2T5 733 aaKnown RBP12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 MYOCDQ8IZQ8 938 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 TMEM40Q8WWA1 233 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 HSD17B14Q9BPX1 270 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 ZBED2Q9BTP6 218 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms