RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 DBR1Q9UK59 544 aaKnown RBP20.01■□□□□ 0.79
ACTN4-202ENST00000390009 MYPNQ86TC9 1320 aa20.01■□□□□ 0.79
ACTN4-202ENST00000390009 NOL4O94818 638 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 LYPLA2O95372 231 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 IPO7O95373 1038 aaKnown RBP20■□□□□ 0.79
ACTN4-202ENST00000390009 STXBP4Q6ZWJ1 553 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 DAW1Q8N136 415 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 SLC35F6Q8N357 371 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 RBM46Q8TBY0 533 aaKnown RBP20■□□□□ 0.79
ACTN4-202ENST00000390009 CRACR2AQ9BSW2 395 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 LSM14BQ9BX40 385 aaKnown RBP20■□□□□ 0.79
ACTN4-202ENST00000390009 ACAD9Q9H845 621 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 ARHGAP20Q9P2F6 1191 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 LCTP09848 1927 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 SLC16A3O15427 465 aaKnown RBP20■□□□□ 0.79
ACTN4-202ENST00000390009 PLEKP08567 350 aaPredicted RBP20■□□□□ 0.79
ACTN4-202ENST00000390009 RARRES1P49788 294 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 JAK3P52333 1124 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 PLS1Q14651 629 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 ELF2Q15723 593 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 PDXDC1Q6P996 788 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 MNS1Q8NEH6 495 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 NSUN6Q8TEA1 469 aaKnown RBP20■□□□□ 0.79
ACTN4-202ENST00000390009 DCPSQ96C86 337 aaKnown RBP20■□□□□ 0.79
ACTN4-202ENST00000390009 CCDC42Q96M95 316 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 CARD6Q9BX69 1037 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 IKZF4Q9H2S9 585 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 TRIM10Q9UDY6 481 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 DOCK5Q9H7D0 1870 aa20■□□□□ 0.79
ACTN4-202ENST00000390009 CCNE2O96020 404 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 EPB41P11171 864 aaKnown RBP19.99■□□□□ 0.79
ACTN4-202ENST00000390009 XRCC5P13010 732 aaKnown RBP19.99■□□□□ 0.79
ACTN4-202ENST00000390009 CASP4P49662 377 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 KRT76Q01546 638 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 PPP2R3AQ06190 1150 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 UGCGQ16739 394 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 ZNF662Q6ZS27 426 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 KIAA1328Q86T90 577 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 KSR1Q8IVT5 923 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 SULF1Q8IWU6 871 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 GPRASP2Q96D09 838 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 METTL14Q9HCE5 456 aaKnown RBP19.99■□□□□ 0.79
ACTN4-202ENST00000390009 NLRC4Q9NPP4 1024 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 A1CFQ9NQ94 594 aaKnown RBP19.99■□□□□ 0.79
ACTN4-202ENST00000390009 CYP39A1Q9NYL5 469 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 TCEAL9Q9UHQ7 104 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 GUCA1BQ9UMX6 200 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 WDR64B1ANS9 1081 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 ADM5C9JUS6 153 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 YWHABP31946 246 aaKnown RBP19.99■□□□□ 0.79
ACTN4-202ENST00000390009 SFNP31947 248 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 NFIL3Q16649 462 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 NLRX1Q86UT6 975 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 INPP4AQ96PE3 977 aaPredicted RBP19.99■□□□□ 0.79
ACTN4-202ENST00000390009 PCDHB13Q9Y5F0 798 aa19.99■□□□□ 0.79
ACTN4-202ENST00000390009 AFPP02771 609 aaKnown RBP19.98■□□□□ 0.79
ACTN4-202ENST00000390009 ERCC6LQ2NKX8 1250 aa19.98■□□□□ 0.79
ACTN4-202ENST00000390009 CCDC122Q5T0U0 273 aa19.98■□□□□ 0.79
ACTN4-202ENST00000390009 MAEAQ7L5Y9 396 aa19.98■□□□□ 0.79
ACTN4-202ENST00000390009 C4orf19Q8IY42 314 aa19.98■□□□□ 0.79
ACTN4-202ENST00000390009 PDCL2Q8N4E4 241 aa19.98■□□□□ 0.79
ACTN4-202ENST00000390009 TFR2Q9UP52 801 aa19.98■□□□□ 0.79
ACTN4-202ENST00000390009 CTAGE9A4FU28 777 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 MAFGO15525 162 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 POLR2FP61218 127 aaKnown RBP19.97■□□□□ 0.79
ACTN4-202ENST00000390009 PSMC5P62195 406 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 CYP27A1Q02318 531 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 DCAF17Q5H9S7 520 aaPredicted RBP19.97■□□□□ 0.79
ACTN4-202ENST00000390009 JAKMIP2Q96AA8 810 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 NUCKS1Q9H1E3 243 aaKnown RBP19.97■□□□□ 0.79
ACTN4-202ENST00000390009 CSADQ9Y600 493 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 ZNF263O14978 683 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 PPP1R12BO60237 982 aaPredicted RBP19.97■□□□□ 0.79
ACTN4-202ENST00000390009 PPP1R37O75864 691 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 APBA1Q02410 837 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 SPA17Q15506 151 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 TREML2Q5T2D2 321 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 HS2ST1Q7LGA3 356 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 CNKSR2Q8WXI2 1034 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 CCDC43Q96MW1 224 aaKnown RBP19.97■□□□□ 0.79
ACTN4-202ENST00000390009 STRA6Q9BX79 667 aa19.97■□□□□ 0.79
ACTN4-202ENST00000390009 LARSQ9P2J5 1176 aaKnown RBP19.97■□□□□ 0.79
ACTN4-202ENST00000390009 TMEM150BA6NC51 233 aa19.96■□□□□ 0.79
ACTN4-202ENST00000390009 RCCD1A6NED2 376 aa19.96■□□□□ 0.79
ACTN4-202ENST00000390009 KRT86O43790 486 aa19.96■□□□□ 0.79
ACTN4-202ENST00000390009 USO1O60763 962 aaKnown RBP19.96■□□□□ 0.79
ACTN4-202ENST00000390009 RGS20O76081 388 aa19.96■□□□□ 0.79
ACTN4-202ENST00000390009 EIF4A3P38919 411 aaKnown RBP19.96■□□□□ 0.79
ACTN4-202ENST00000390009 KIF11P52732 1056 aa19.96■□□□□ 0.79
ACTN4-202ENST00000390009 ZNF746Q6NUN9 644 aaPredicted RBP19.96■□□□□ 0.79
ACTN4-202ENST00000390009 NAPGQ99747 312 aaPredicted RBP19.96■□□□□ 0.79
ACTN4-202ENST00000390009 SH2D3AQ9BRG2 576 aa19.96■□□□□ 0.79
ACTN4-202ENST00000390009 GBP3Q9H0R5 595 aa19.96■□□□□ 0.79
ACTN4-202ENST00000390009 DEF6Q9H4E7 631 aa19.96■□□□□ 0.79
ACTN4-202ENST00000390009 A0A0G2JMZ2 1700 aa19.96■□□□□ 0.79
ACTN4-202ENST00000390009 K7ENM7 598 aa19.96■□□□□ 0.79
ACTN4-202ENST00000390009 TADA3O75528 432 aa19.96■□□□□ 0.79
ACTN4-202ENST00000390009 PSMC2P35998 433 aaKnown RBP19.96■□□□□ 0.79
ACTN4-202ENST00000390009 UTP14CQ5TAP6 766 aaKnown RBP19.96■□□□□ 0.79
ACTN4-202ENST00000390009 TCERG1LQ5VWI1 586 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms