RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 LSM14BQ9BX40 385 aaKnown RBP11.19□□□□□ -0.62
LTN1-203ENST00000389195 NHEJ1Q9H9Q4 299 aaPredicted RBP11.19□□□□□ -0.62
LTN1-203ENST00000389195 CAPN11Q9UMQ6 739 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 EPN1Q9Y6I3 576 aaPredicted RBP11.19□□□□□ -0.62
LTN1-203ENST00000389195 DOCK1Q14185 1865 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 ZMYM2Q9UBW7 1377 aa11.19□□□□□ -0.62
LTN1-203ENST00000389195 MACROD2A1Z1Q3 448 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 CCDC169A6NNP5 214 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 MARK3P27448 753 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 QARSP47897 775 aaKnown RBP11.18□□□□□ -0.62
LTN1-203ENST00000389195 ZNF720Q7Z2F6 126 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 TRIM50Q86XT4 487 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 PSMB7Q99436 277 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 CBWD1Q9BRT8 395 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 ACAD9Q9H845 621 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 EHMT1Q9H9B1 1298 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 HOXC10Q9NYD6 342 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 ARHGAP20Q9P2F6 1191 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 ADAMTS5Q9UNA0 930 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 PAPPA2Q9BXP8 1791 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 C19orf81C9J6K1 198 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 K7ENM7 598 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 SRGAP2O75044 1071 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 NDUFA10O95299 355 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 P4HBP07237 508 aaKnown RBP11.18□□□□□ -0.62
LTN1-203ENST00000389195 DNA2P51530 1060 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 HERVK_113P62684 666 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 IRX3P78415 501 aaPredicted RBP11.18□□□□□ -0.62
LTN1-203ENST00000389195 SETQ01105 290 aaPredicted RBP11.18□□□□□ -0.62
LTN1-203ENST00000389195 GFPT1Q06210 699 aaPredicted RBP11.18□□□□□ -0.62
LTN1-203ENST00000389195 EPM2AIP1Q7L775 607 aaPredicted RBP11.18□□□□□ -0.62
LTN1-203ENST00000389195 NLRX1Q86UT6 975 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 SYCP3Q8IZU3 236 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 BSNDQ8WZ55 320 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 COPS5Q92905 334 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 PRIMPOLQ96LW4 560 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 CCDC43Q96MW1 224 aaKnown RBP11.18□□□□□ -0.62
LTN1-203ENST00000389195 POP1Q99575 1024 aaKnown RBP11.18□□□□□ -0.62
LTN1-203ENST00000389195 LRRC27Q9C0I9 530 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 TUFT1Q9NNX1 390 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 PHIPQ8WWQ0 1821 aa11.18□□□□□ -0.62
LTN1-203ENST00000389195 ITIH6Q6UXX5 1313 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 ELF2Q15723 593 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 SLC35F6Q8N357 371 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 NSUN6Q8TEA1 469 aaKnown RBP11.17□□□□□ -0.62
LTN1-203ENST00000389195 RIT2Q99578 217 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 CARD6Q9BX69 1037 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 PORCNQ9H237 461 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 CETN3O15182 167 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 TLR2O60603 784 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 TPM2P07951 284 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 KCNA2P16389 499 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 ARHGAP25P42331 645 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 NCBP1Q09161 790 aaKnown RBP11.17□□□□□ -0.62
LTN1-203ENST00000389195 TRAF1Q13077 416 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 MTERF2Q49AM1 385 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 ARHGAP29Q52LW3 1261 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 CYP26C1Q6V0L0 522 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 CACNA2D4Q7Z3S7 1137 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 FAM114A1Q8IWE2 563 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 FAM133AQ8N9E0 248 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 TMEM143Q96AN5 459 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 MOV10L1Q9BXT6 1211 aaKnown RBP11.17□□□□□ -0.62
LTN1-203ENST00000389195 EFCC1Q9HA90 598 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 PUF60Q9UHX1 559 aaKnown RBP11.17□□□□□ -0.62
LTN1-203ENST00000389195 MYH11P35749 1972 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 PITPNM2Q9BZ72 1349 aa11.17□□□□□ -0.62
LTN1-203ENST00000389195 SOWAHBA6NEL2 793 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 ZSCAN12O43309 604 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 CCND2P30279 289 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 EIF4A3P38919 411 aaKnown RBP11.16□□□□□ -0.62
LTN1-203ENST00000389195 MCTP2Q6DN12 878 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 TRIM59Q8IWR1 403 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 SAAL1Q96ER3 474 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 CEP170P1Q96L14 293 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 PPP1R16BQ96T49 567 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 DNAJC7Q99615 494 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 SPATC1LQ9H0A9 340 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 TAF1DQ9H5J8 278 aaPredicted RBP11.16□□□□□ -0.62
LTN1-203ENST00000389195 PDGFCQ9NRA1 345 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 RNF216Q9NWF9 866 aaPredicted RBP11.16□□□□□ -0.62
LTN1-203ENST00000389195 RBPJLQ9UBG7 517 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 SEPT9Q9UHD8 586 aaPredicted RBP11.16□□□□□ -0.62
LTN1-203ENST00000389195 MCM3APO60318 1980 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 ARIH2O95376 493 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 IREB2P48200 963 aaKnown RBP11.16□□□□□ -0.62
LTN1-203ENST00000389195 CHMP4BP1P59074 171 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 ACTR2P61160 394 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 DRP2Q13474 957 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 RAPGEF1Q13905 1077 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 CBWD6Q4V339 395 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 SEZ6Q53EL9 994 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 CBWD3Q5JTY5 395 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 CBWD5Q5RIA9 395 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 SCARA3Q6AZY7 606 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 LBX2Q6XYB7 198 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 ACP6Q9NPH0 428 aa11.16□□□□□ -0.62
LTN1-203ENST00000389195 ARMCX3Q9UH62 379 aaPredicted RBP11.16□□□□□ -0.62
LTN1-203ENST00000389195 RBBP6Q7Z6E9 1792 aaKnown RBP11.16□□□□□ -0.62
LTN1-203ENST00000389195 A0A1W2PQC6 194 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms