RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 MKL1Q969V6 931 aa15.2■□□□□ 0.02
NEK4-202ENST00000383721 GREB1LQ9C091 1923 aaPredicted RBP15.19■□□□□ 0.02
NEK4-202ENST00000383721 MYH10P35580 1976 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 MEIS1O00470 390 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 ACTN1P12814 892 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 HOXD13P35453 343 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 PRR16Q569H4 304 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 SLFN13Q68D06 897 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 MOXD1Q6UVY6 613 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 PLEKHA4Q9H4M7 779 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 TMEM51Q9NW97 253 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 TMOD2Q9NZR1 351 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 PACSIN2Q9UNF0 486 aaPredicted RBP15.19■□□□□ 0.02
NEK4-202ENST00000383721 DDTLA6NHG4 134 aaPredicted RBP15.19■□□□□ 0.02
NEK4-202ENST00000383721 SPATA31C1P0DKV0 1188 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 PABPC4Q13310 644 aaKnown RBP eCLIP15.19■□□□□ 0.02
NEK4-202ENST00000383721 SIAH1Q8IUQ4 282 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 DCAF4Q8WV16 495 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 INPP4AQ96PE3 977 aaPredicted RBP15.19■□□□□ 0.02
NEK4-202ENST00000383721 RSPH14Q9UHP6 348 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 TRAF3IP3Q9Y228 551 aa15.19■□□□□ 0.02
NEK4-202ENST00000383721 GRID2IPA4D2P6 1211 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 SLC9A1P19634 815 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 SNAP25P60880 206 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 AP3B2Q13367 1082 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 RASA3Q14644 834 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 EPM2AIP1Q7L775 607 aaPredicted RBP15.18■□□□□ 0.02
NEK4-202ENST00000383721 IRF2BP2Q7Z5L9 587 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 SFR1Q86XK3 245 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 LENG9Q96B70 501 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 REEP2Q9BRK0 252 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 TSPYL1Q9H0U9 437 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 GDF3Q9NR23 364 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 NYAP2Q9P242 653 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 ZSCAN5CA6NGD5 496 aaPredicted RBP15.18■□□□□ 0.02
NEK4-202ENST00000383721 PPFIA4O75335 1185 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 CARSP49589 748 aaKnown RBP15.18■□□□□ 0.02
NEK4-202ENST00000383721 PTK2Q05397 1052 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 C10orf67Q8IYJ2 551 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 SYT2Q8N9I0 419 aaPredicted RBP15.18■□□□□ 0.02
NEK4-202ENST00000383721 DEFB129Q9H1M3 183 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 CLEC11AQ9Y240 323 aa15.18■□□□□ 0.02
NEK4-202ENST00000383721 ADM5C9JUS6 153 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 RPA1P27694 616 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 KNOP1Q1ED39 458 aaKnown RBP15.17■□□□□ 0.02
NEK4-202ENST00000383721 ALS2CLQ60I27 953 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 ZNF571Q7Z3V5 609 aaPredicted RBP15.17■□□□□ 0.02
NEK4-202ENST00000383721 FRMD5Q7Z6J6 570 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 IFT20Q8IY31 132 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 GPBP1L1Q9HC44 474 aaPredicted RBP15.17■□□□□ 0.02
NEK4-202ENST00000383721 PLCB1Q9NQ66 1216 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 ARMCX3Q9UH62 379 aaPredicted RBP15.17■□□□□ 0.02
NEK4-202ENST00000383721 DNM3Q9UQ16 869 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 POLR2AP24928 1970 aaKnown RBP15.17■□□□□ 0.02
NEK4-202ENST00000383721 ESYT3A0FGR9 886 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 GOLGA8KD6RF30 607 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 FAM86B1E9PN63 330 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 HEXIM1O94992 359 aaKnown RBP15.17■□□□□ 0.02
NEK4-202ENST00000383721 FAM86B2P0C5J1 330 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 MYBP10242 640 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 UCHL3P15374 230 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 YY1P25490 414 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 CERKLQ49MI3 558 aaPredicted RBP15.17■□□□□ 0.02
NEK4-202ENST00000383721 Q4G0T1 1027 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 MAP1SQ66K74 1059 aaPredicted RBP15.17■□□□□ 0.02
NEK4-202ENST00000383721 PNMA8AQ86V59 439 aaPredicted RBP15.17■□□□□ 0.02
NEK4-202ENST00000383721 ARL8AQ96BM9 186 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 BCAS3Q9H6U6 928 aa15.17■□□□□ 0.02
NEK4-202ENST00000383721 TBX3O15119 743 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 OPA1O60313 960 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 AFPP02771 609 aaKnown RBP15.16■□□□□ 0.02
NEK4-202ENST00000383721 FAM153BP0C7A2 387 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 EPB41P11171 864 aaKnown RBP15.16■□□□□ 0.02
NEK4-202ENST00000383721 IRAK1P51617 712 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 GUCY2DQ02846 1103 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 NNTQ13423 1086 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 FAM153CQ494X1 144 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 ERMNQ8TAM6 284 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 EPB41L5Q9HCM4 733 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 FAM153AQ9UHL3 310 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 NFU1Q9UMS0 254 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 MYH4Q9Y623 1939 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 RSPH10B2B2RC85 870 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 AKAP3O75969 853 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 RSPH10BP0C881 870 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 TAL1P17542 331 aaPredicted RBP15.16■□□□□ 0.02
NEK4-202ENST00000383721 PON1P27169 355 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 RNASE9P60153 205 aaKnown RBP15.16■□□□□ 0.02
NEK4-202ENST00000383721 SLC20A2Q08357 652 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 PPFIA1Q13136 1202 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 TTMPQ5BVD1 217 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 TEPSINQ96N21 525 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 ZIM3Q96PE6 472 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 KRT12Q99456 494 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 AMNQ9BXJ7 453 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 RASSF4Q9H2L5 321 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 PGAP2Q9UHJ9 254 aa15.16■□□□□ 0.02
NEK4-202ENST00000383721 BTNL10A8MVZ5 291 aa15.15■□□□□ 0.02
NEK4-202ENST00000383721 PDXKO00764 312 aa15.15■□□□□ 0.02
NEK4-202ENST00000383721 HSF2BPO75031 334 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms