RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 TTYH3Q9C0H2 523 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 UTYO14607 1347 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 EPHB6O15197 1021 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 ITGA4P13612 1032 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 KLRC1P26715 233 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 NEXNQ0ZGT2 675 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 PABPC4Q13310 644 aaKnown RBP eCLIP16.25■□□□□ 0.19
VLDLR-202ENST00000382099 NCCRP1Q6ZVX7 275 aaPredicted RBP16.25■□□□□ 0.19
VLDLR-202ENST00000382099 EPS8L3Q8TE67 593 aaKnown RBP16.25■□□□□ 0.19
VLDLR-202ENST00000382099 FAM136AQ96C01 138 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 CORO1BQ9BR76 489 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 ADAM7Q9H2U9 754 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 ZNF180Q9UJW8 692 aa16.25■□□□□ 0.19
VLDLR-202ENST00000382099 BARX2Q9UMQ3 279 aaPredicted RBP16.25■□□□□ 0.19
VLDLR-202ENST00000382099 MLH1P40692 756 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 TMTC2Q8N394 836 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 RIBC1Q8N443 379 aaPredicted RBP16.24■□□□□ 0.19
VLDLR-202ENST00000382099 DENND2DQ9H6A0 471 aaPredicted RBP16.24■□□□□ 0.19
VLDLR-202ENST00000382099 PLAGL2Q9UPG8 496 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 SLC4A4Q9Y6R1 1079 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 TRIM43BA6NCK2 446 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 LSM1O15116 133 aaKnown RBP16.24■□□□□ 0.19
VLDLR-202ENST00000382099 AFPP02771 609 aaKnown RBP16.24■□□□□ 0.19
VLDLR-202ENST00000382099 CCDC166P0CW27 439 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 SLC29A2Q14542 456 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 PDIA6Q15084 440 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 LENG1Q96BZ8 264 aaPredicted RBP16.24■□□□□ 0.19
VLDLR-202ENST00000382099 LUC7LQ9NQ29 371 aaKnown RBP16.24■□□□□ 0.19
VLDLR-202ENST00000382099 PCDH11XQ9BZA7 1347 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 MYH7P12883 1935 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 KAT6BQ8WYB5 2073 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 CAPN9O14815 690 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 ITGA2BP08514 1039 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 RTP1P59025 263 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 EXOC3L1Q86VI1 746 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 SPATA24Q86W54 205 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 SLF2Q8IX21 1173 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 CEP70Q8NHQ1 597 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 TBC1D10AQ9BXI6 508 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 DCLRE1BQ9H816 532 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 LARSQ9P2J5 1176 aaKnown RBP16.24■□□□□ 0.19
VLDLR-202ENST00000382099 WDR37Q9Y2I8 494 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 SH3GLB1Q9Y371 365 aa16.24■□□□□ 0.19
VLDLR-202ENST00000382099 FAM170AA1A519 330 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 MAGEB3O15480 346 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 DDX58O95786 925 aaKnown RBP16.23■□□□□ 0.19
VLDLR-202ENST00000382099 ZFXP17010 805 aaPredicted RBP16.23■□□□□ 0.19
VLDLR-202ENST00000382099 GALK1P51570 392 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 KCNMA1Q12791 1236 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 CNGA2Q16280 664 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 RFX8Q6ZV50 586 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 TAOK1Q7L7X3 1001 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 CCDC25Q86WR0 208 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 AGGF1Q8N302 714 aaeCLIP16.23■□□□□ 0.19
VLDLR-202ENST00000382099 ZKSCAN3Q9BRR0 538 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 FOXP1Q9H334 677 aaPredicted RBP16.23■□□□□ 0.19
VLDLR-202ENST00000382099 GMEB1Q9Y692 573 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 KIF13AQ9H1H9 1805 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 MAP3K7O43318 606 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 CYP1A1P04798 512 aaPredicted RBP16.23■□□□□ 0.19
VLDLR-202ENST00000382099 RASA1P20936 1047 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 PMS2P54278 862 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 CCDC152Q4G0S7 254 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 COPS6Q7L5N1 327 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 NKX2-3Q8TAU0 364 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 NR1H4Q96RI1 486 aaPredicted RBP16.23■□□□□ 0.19
VLDLR-202ENST00000382099 MYLK2Q9H1R3 596 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 TDRKHQ9Y2W6 561 aaKnown RBP16.23■□□□□ 0.19
VLDLR-202ENST00000382099 LSAMPQ13449 338 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 KHDC1Q4VXA5 237 aaKnown RBP16.23■□□□□ 0.19
VLDLR-202ENST00000382099 TRIM50Q86XT4 487 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 CYP4X1Q8N118 509 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 XAGE3Q8WTP9 111 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 STMN2Q93045 179 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 CLIC5Q9NZA1 410 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 COMMD3-BMI1R4GMX3 469 aa16.23■□□□□ 0.19
VLDLR-202ENST00000382099 PYGMP11217 842 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 STX2P32856 288 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 ADARP55265 1226 aaKnown RBP16.22■□□□□ 0.19
VLDLR-202ENST00000382099 NTRK3Q16288 839 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 CERKLQ49MI3 558 aaPredicted RBP16.22■□□□□ 0.19
VLDLR-202ENST00000382099 LIN52Q52LA3 116 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 ZNF554Q86TJ5 538 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 ADSSL1Q8N142 457 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 FBXL16Q8N461 479 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 TGS1Q96RS0 853 aaKnown RBP16.22■□□□□ 0.19
VLDLR-202ENST00000382099 NOC2LQ9Y3T9 749 aaKnown RBP16.22■□□□□ 0.19
VLDLR-202ENST00000382099 PGRMC1O00264 195 aaKnown RBP16.22■□□□□ 0.19
VLDLR-202ENST00000382099 CBX6O95503 412 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 RASSF2P50749 326 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 PTPN12Q05209 780 aaKnown RBP16.22■□□□□ 0.19
VLDLR-202ENST00000382099 GRAMD4Q6IC98 578 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 SCUBE1Q8IWY4 988 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 FBXO41Q8TF61 875 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 BRD8Q9H0E9 1235 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 CUEDC2Q9H467 287 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 DDX18Q9NVP1 670 aaKnown RBP16.22■□□□□ 0.19
VLDLR-202ENST00000382099 MRC1P22897 1456 aa16.22■□□□□ 0.19
VLDLR-202ENST00000382099 TMEM221A6NGB7 291 aa16.21■□□□□ 0.19
VLDLR-202ENST00000382099 NKRFO15226 690 aaKnown RBP eCLIP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms