RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 THRSPQ92748 146 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 STAMBPL1Q96FJ0 436 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 CHMP6Q96FZ7 201 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 PAGE5Q96GU1 130 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 FRMD6Q96NE9 622 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 CTTNBP2NLQ9P2B4 639 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 KLHL14Q9P2G3 628 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 SEPT3Q9UH03 358 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 ATP6V1HQ9UI12 483 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 SCOCQ9UIL1 159 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 USP21Q9UK80 565 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 CAPN11Q9UMQ6 739 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 CD163L1Q9NR16 1453 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 LIN7AO14910 233 aaPredicted RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 CTDNEP1O95476 244 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 FECHP22830 423 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 ASIC1P78348 528 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 GUCY1A3Q02108 690 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 MPRIPQ6WCQ1 1025 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 DTHD1Q6ZMT9 781 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 UBE2R2Q712K3 238 aaPredicted RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 GRAMD1CQ8IYS0 662 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 CMTR1Q8N1G2 835 aaKnown RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 SH2D3CQ8N5H7 860 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 SPATA4Q8NEY3 305 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 XAGE3Q8WTP9 111 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 RIN2Q8WYP3 895 aaPredicted RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 STMN2Q93045 179 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 PHKBQ93100 1093 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 ERLEC1Q96DZ1 483 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 QTRT2Q9H974 415 aaKnown RBP6.16□□□□□ -1.42
RFC1-202ENST00000381897 AGTPBP1Q9UPW5 1226 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 PCDHA13Q9Y5I0 950 aa6.16□□□□□ -1.42
RFC1-202ENST00000381897 FAM237AA0A1B0GTK4 181 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 CTNND1O60716 968 aaKnown RBP6.15□□□□□ -1.42
RFC1-202ENST00000381897 DNAJC8O75937 253 aaPredicted RBP6.15□□□□□ -1.42
RFC1-202ENST00000381897 PDE6CP51160 858 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 KAZNQ674X7 775 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 CHADLQ6NUI6 762 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 LMBR1LQ6UX01 489 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 CRELD2Q6UXH1 353 aaPredicted RBP6.15□□□□□ -1.42
RFC1-202ENST00000381897 C2CD5Q86YS7 1000 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 ARHGAP24Q8N264 748 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 FBXL16Q8N461 479 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 KLHL29Q96CT2 875 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 SEC16BQ96JE7 1060 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 KRT12Q99456 494 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 NOD2Q9HC29 1040 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 ABCF2Q9UG63 623 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 CCNL1Q9UK58 526 aaPredicted RBP6.15□□□□□ -1.42
RFC1-202ENST00000381897 NFU1Q9UMS0 254 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 MAST3O60307 1309 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 PRR36Q9H6K5 1346 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 CHD2O14647 1828 aaKnown RBP6.15□□□□□ -1.42
RFC1-202ENST00000381897 CLTCQ00610 1675 aaKnown RBP6.15□□□□□ -1.42
RFC1-202ENST00000381897 SRGAP2O75044 1071 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 PAX7P23759 505 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 FMR1Q06787 632 aaKnown RBP eCLIP6.15□□□□□ -1.42
RFC1-202ENST00000381897 MYBPC2Q14324 1141 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 SFMBT2Q5VUG0 894 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 KRT39Q6A163 491 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 GPR139Q6DWJ6 353 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 KRT26Q7Z3Y9 468 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 TMEM139Q8IV31 216 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 SLF2Q8IX21 1173 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 FAM9CQ8IZT9 166 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 MPP5Q8N3R9 675 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 IL17REQ8NFR9 667 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 SYMPKQ92797 1274 aaKnown RBP6.15□□□□□ -1.42
RFC1-202ENST00000381897 EDC3Q96F86 508 aaKnown RBP6.15□□□□□ -1.42
RFC1-202ENST00000381897 TTC1Q99614 292 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 YIPF3Q9GZM5 350 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 CUEDC2Q9H467 287 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 INTS9Q9NV88 658 aaKnown RBP6.15□□□□□ -1.42
RFC1-202ENST00000381897 HDAC6Q9UBN7 1215 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 LRWD1Q9UFC0 647 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 KLHL3Q9UH77 587 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 TSC22D4Q9Y3Q8 395 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 PCDHB11Q9Y5F2 797 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 ANKARQ7Z5J8 1434 aa6.15□□□□□ -1.42
RFC1-202ENST00000381897 NEURL1BA8MQ27 555 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 CCDC188H7C350 402 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 EYA2O00167 538 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 GPAA1O43292 621 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 FBXO24O75426 580 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 GYPCP04921 128 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 SNRPA1P09661 255 aaKnown RBP6.15□□□□□ -1.43
RFC1-202ENST00000381897 ADCY2Q08462 1091 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 ITIH4Q14624 930 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 LLGL1Q15334 1064 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 C10orf76Q5T2E6 689 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 ATP11CQ8NB49 1132 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 GPR152Q8TDT2 470 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 ASAP3Q8TDY4 903 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 SLC10A4Q96EP9 437 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 SIPA1Q96FS4 1042 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 RNPC3Q96LT9 517 aaKnown RBP6.15□□□□□ -1.43
RFC1-202ENST00000381897 ZIM3Q96PE6 472 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 AGXT2Q9BYV1 514 aa6.15□□□□□ -1.43
RFC1-202ENST00000381897 RPS6KA6Q9UK32 745 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms