RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 LRSAM1Q6UWE0 723 aa4.42□□□□□ -1.7
SMC6-202ENST00000381272 CABP7Q86V35 215 aa4.42□□□□□ -1.7
SMC6-202ENST00000381272 LDHDQ86WU2 507 aa4.42□□□□□ -1.7
SMC6-202ENST00000381272 MCF2L2Q86YR7 1114 aa4.42□□□□□ -1.7
SMC6-202ENST00000381272 TRIM59Q8IWR1 403 aa4.42□□□□□ -1.7
SMC6-202ENST00000381272 CNTROBQ8N137 903 aa4.42□□□□□ -1.7
SMC6-202ENST00000381272 SLC43A3Q8NBI5 491 aa4.42□□□□□ -1.7
SMC6-202ENST00000381272 COPS5Q92905 334 aa4.42□□□□□ -1.7
SMC6-202ENST00000381272 LSG1Q9H089 658 aaKnown RBP4.42□□□□□ -1.7
SMC6-202ENST00000381272 ZNF408Q9H9D4 720 aa4.42□□□□□ -1.7
SMC6-202ENST00000381272 MAP3K2Q9Y2U5 619 aa4.42□□□□□ -1.7
SMC6-202ENST00000381272 R3HCC1Q9Y3T6 440 aaKnown RBP4.42□□□□□ -1.7
SMC6-202ENST00000381272 CHD2O14647 1828 aaKnown RBP4.41□□□□□ -1.7
SMC6-202ENST00000381272 NFAT5O94916 1531 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 LMO7Q8WWI1 1683 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 RNMTO43148 476 aaKnown RBP4.41□□□□□ -1.7
SMC6-202ENST00000381272 CDR1P51861 262 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 AK2P54819 239 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 PTH1RQ03431 593 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 SCRN1Q12765 414 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 SSPNQ14714 243 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 C1orf141Q5JVX7 400 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 GTF2IRD2BQ6EKJ0 949 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 GTF2IRD2Q86UP8 949 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 CPNE8Q86YQ8 564 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 TMEM151BQ8IW70 566 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 LZTR1Q8N653 840 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 ORAI2Q96SN7 254 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 CYP26B1Q9NR63 512 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 C9orf78Q9NZ63 289 aaPredicted RBP4.41□□□□□ -1.7
SMC6-202ENST00000381272 LRP2BPQ9P2M1 347 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 DBR1Q9UK59 544 aaKnown RBP4.41□□□□□ -1.7
SMC6-202ENST00000381272 RGPD5Q99666 1765 aa4.41□□□□□ -1.7
SMC6-202ENST00000381272 RPAP1Q9BWH6 1393 aaPredicted RBP4.41□□□□□ -1.7
SMC6-202ENST00000381272 RAD50Q92878 1312 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 PXDNQ92626 1479 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 B2RBV5 119 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 F8W031 263 aaPredicted RBP4.4□□□□□ -1.7
SMC6-202ENST00000381272 LARGE1O95461 756 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 MBD3O95983 291 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 HOXB7P09629 217 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 CASTP20810 708 aaKnown RBP4.4□□□□□ -1.7
SMC6-202ENST00000381272 MSNP26038 577 aaKnown RBP4.4□□□□□ -1.7
SMC6-202ENST00000381272 SV2CQ496J9 727 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 KSR2Q6VAB6 950 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 RUFY3Q7L099 469 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 ZSCAN30Q86W11 494 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 CLASRPQ8N2M8 674 aaKnown RBP4.4□□□□□ -1.7
SMC6-202ENST00000381272 KCNH5Q8NCM2 988 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 USP33Q8TEY7 942 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 IL17RAQ96F46 866 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 SUCLG2Q96I99 432 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 MRGPRX3Q96LB0 322 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 TTC14Q96N46 770 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 GMLQ99445 158 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 CCDC8Q9H0W5 538 aaPredicted RBP4.4□□□□□ -1.7
SMC6-202ENST00000381272 NKX2-4Q9H2Z4 354 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 GPRC5CQ9NQ84 441 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 IGSF5Q9NSI5 407 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 DIAPH3Q9NSV4 1193 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 CLEC1BQ9P126 229 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 DBF4Q9UBU7 674 aaPredicted RBP4.4□□□□□ -1.7
SMC6-202ENST00000381272 CNPY2Q9Y2B0 182 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 RWDD3Q9Y3V2 267 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 PCDHA5Q9Y5H7 936 aa4.4□□□□□ -1.7
SMC6-202ENST00000381272 MED1Q15648 1581 aaPredicted RBP4.4□□□□□ -1.71
SMC6-202ENST00000381272 WDR33Q9C0J8 1336 aaKnown RBP4.4□□□□□ -1.71
SMC6-202ENST00000381272 IRS4O14654 1257 aaPredicted RBP4.39□□□□□ -1.71
SMC6-202ENST00000381272 SUSD5O60279 629 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 NPHS1O60500 1241 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 GLRX3O76003 335 aaKnown RBP4.39□□□□□ -1.71
SMC6-202ENST00000381272 GCP02774 474 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 IFIT2P09913 472 aaKnown RBP4.39□□□□□ -1.71
SMC6-202ENST00000381272 GLI4P10075 376 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 PLS3P13797 630 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 MYL6BP14649 208 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 PI3P19957 117 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 ZNF200P98182 395 aaPredicted RBP4.39□□□□□ -1.71
SMC6-202ENST00000381272 SLC39A6Q13433 755 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 TARBP2Q15633 366 aaKnown RBP4.39□□□□□ -1.71
SMC6-202ENST00000381272 ADCK5Q3MIX3 580 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 HSP90AB4PQ58FF6 505 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 TCERG1LQ5VWI1 586 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 AACSQ86V21 672 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 IGDCC3Q8IVU1 814 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 CCDC83Q8IWF9 413 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 JAKMIP1Q96N16 626 aaKnown RBP4.39□□□□□ -1.71
SMC6-202ENST00000381272 MMP19Q99542 508 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 SIL1Q9H173 461 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 TSPY26PQ9H489 355 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 ECHDC1Q9NTX5 307 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 GULP1Q9UBP9 304 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 LIMCH1Q9UPQ0 1083 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 SMC3Q9UQE7 1217 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 TTC41PQ6P2S7 1318 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 USP42Q9H9J4 1324 aaKnown RBP4.39□□□□□ -1.71
SMC6-202ENST00000381272 C7orf72A4D263 438 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 STX6O43752 255 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 ALDH1L1O75891 902 aa4.39□□□□□ -1.71
SMC6-202ENST00000381272 SASH1O94885 1247 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms