RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SPNS2Q8IVW8 549 aa14.73□□□□□ -0.05
RPAIN-202ENST00000381208 BBXQ8WY36 941 aaPredicted RBP14.73□□□□□ -0.05
RPAIN-202ENST00000381208 PLVAPQ9BX97 442 aa14.73□□□□□ -0.05
RPAIN-202ENST00000381208 TM6SF1Q9BZW5 370 aa14.73□□□□□ -0.05
RPAIN-202ENST00000381208 UBE2ZQ9H832 354 aaPredicted RBP14.73□□□□□ -0.05
RPAIN-202ENST00000381208 CYP46A1Q9Y6A2 500 aa14.73□□□□□ -0.05
RPAIN-202ENST00000381208 SIP14410 1827 aa14.73□□□□□ -0.05
RPAIN-202ENST00000381208 BDP1A6H8Y1 2624 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 ADGRA3Q8IWK6 1321 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.72□□□□□ -0.05
RPAIN-202ENST00000381208 DDX39AO00148 427 aaKnown RBP14.72□□□□□ -0.05
RPAIN-202ENST00000381208 CCNE2O96020 404 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 PSAPP07602 524 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 KLRC1P26715 233 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 PDIA3P30101 505 aaKnown RBP14.72□□□□□ -0.05
RPAIN-202ENST00000381208 CD52P31358 61 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 BMPR1AP36894 532 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 USP11P51784 963 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 KCNQ1P51787 676 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 BTG3Q14201 252 aaPredicted RBP14.72□□□□□ -0.05
RPAIN-202ENST00000381208 NAALADL2Q58DX5 795 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 SWSAP1Q6NVH7 229 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 CCDC60Q8IWA6 550 aaPredicted RBP14.72□□□□□ -0.05
RPAIN-202ENST00000381208 CKAP2LQ8IYA6 745 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 BANK1Q8NDB2 785 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 CLP1Q92989 425 aaKnown RBP14.72□□□□□ -0.05
RPAIN-202ENST00000381208 PHKBQ93100 1093 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 ZNF274Q96GC6 653 aaPredicted RBP14.72□□□□□ -0.05
RPAIN-202ENST00000381208 FAM167AQ96KS9 214 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 SLC26A6Q9BXS9 759 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 AGO3Q9H9G7 860 aaKnown RBP14.72□□□□□ -0.05
RPAIN-202ENST00000381208 ZSWIM6Q9HCJ5 1215 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 PADI3Q9ULW8 664 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 PCDHA10Q9Y5I2 948 aa14.72□□□□□ -0.05
RPAIN-202ENST00000381208 MAFBQ9Y5Q3 323 aaPredicted RBP14.72□□□□□ -0.05
RPAIN-202ENST00000381208 TTC3P53804 2025 aa14.71□□□□□ -0.05
RPAIN-202ENST00000381208 CPLX1O14810 134 aa14.71□□□□□ -0.06
RPAIN-202ENST00000381208 MAGEB2O15479 319 aa14.71□□□□□ -0.06
RPAIN-202ENST00000381208 ST18O60284 1047 aa14.71□□□□□ -0.06
RPAIN-202ENST00000381208 DGKIO75912 1065 aa14.71□□□□□ -0.06
RPAIN-202ENST00000381208 CTNNB1P35222 781 aa14.71□□□□□ -0.06
RPAIN-202ENST00000381208 LEXMQ3ZCV2 418 aa14.71□□□□□ -0.06
RPAIN-202ENST00000381208 PRR16Q569H4 304 aa14.71□□□□□ -0.06
RPAIN-202ENST00000381208 GALNT17Q6IS24 598 aa14.71□□□□□ -0.06
RPAIN-202ENST00000381208 CMTR2Q8IYT2 770 aaKnown RBP14.71□□□□□ -0.06
RPAIN-202ENST00000381208 ZNF689Q96CS4 500 aaPredicted RBP14.71□□□□□ -0.06
RPAIN-202ENST00000381208 C1QTNF1Q9BXJ1 281 aa14.71□□□□□ -0.06
RPAIN-202ENST00000381208 NSUN3Q9H649 340 aaKnown RBP14.71□□□□□ -0.06
RPAIN-202ENST00000381208 RC3H2Q9HBD1 1191 aaKnown RBP14.71□□□□□ -0.06
RPAIN-202ENST00000381208 FAM50BQ9Y247 325 aa14.71□□□□□ -0.06
RPAIN-202ENST00000381208 COL4A4P53420 1690 aaPredicted RBP14.7□□□□□ -0.06
RPAIN-202ENST00000381208 WDR64B1ANS9 1081 aa14.7□□□□□ -0.06
RPAIN-202ENST00000381208 GPR182O15218 404 aa14.7□□□□□ -0.06
RPAIN-202ENST00000381208 DEXIO95424 95 aa14.7□□□□□ -0.06
RPAIN-202ENST00000381208 TMOD1P28289 359 aa14.7□□□□□ -0.06
RPAIN-202ENST00000381208 NLRP5P59047 1200 aa14.7□□□□□ -0.06
RPAIN-202ENST00000381208 SSRP1Q08945 709 aaKnown RBP14.7□□□□□ -0.06
RPAIN-202ENST00000381208 KIAA0319LQ8IZA0 1049 aa14.7□□□□□ -0.06
RPAIN-202ENST00000381208 TRAPPC12Q8WVT3 735 aa14.7□□□□□ -0.06
RPAIN-202ENST00000381208 P2RX5Q93086 422 aa14.7□□□□□ -0.06
RPAIN-202ENST00000381208 PPP2R3CQ969Q6 453 aa14.7□□□□□ -0.06
RPAIN-202ENST00000381208 RIT2Q99578 217 aa14.7□□□□□ -0.06
RPAIN-202ENST00000381208 C1orf112Q9NSG2 853 aa14.7□□□□□ -0.06
RPAIN-202ENST00000381208 XIRP2A4UGR9 3374 aa14.69□□□□□ -0.06
RPAIN-202ENST00000381208 RPS6KA5O75582 802 aa14.69□□□□□ -0.06
RPAIN-202ENST00000381208 SFNP31947 248 aa14.69□□□□□ -0.06
RPAIN-202ENST00000381208 TIE1P35590 1138 aa14.69□□□□□ -0.06
RPAIN-202ENST00000381208 JAK3P52333 1124 aa14.69□□□□□ -0.06
RPAIN-202ENST00000381208 CCT2P78371 535 aaKnown RBP14.69□□□□□ -0.06
RPAIN-202ENST00000381208 RDM1Q8NG50 284 aa14.69□□□□□ -0.06
RPAIN-202ENST00000381208 PABPC5Q96DU9 382 aaKnown RBP14.69□□□□□ -0.06
RPAIN-202ENST00000381208 KIF12Q96FN5 646 aa14.69□□□□□ -0.06
RPAIN-202ENST00000381208 NRBP2Q9NSY0 501 aa14.69□□□□□ -0.06
RPAIN-202ENST00000381208 VPS54Q9P1Q0 977 aa14.69□□□□□ -0.06
RPAIN-202ENST00000381208 LRFN2Q9ULH4 789 aa14.69□□□□□ -0.06
RPAIN-202ENST00000381208 SAMM50Q9Y512 469 aa14.69□□□□□ -0.06
RPAIN-202ENST00000381208 EIF5BO60841 1220 aaKnown RBP14.68□□□□□ -0.06
RPAIN-202ENST00000381208 CDKL5O76039 1030 aa14.68□□□□□ -0.06
RPAIN-202ENST00000381208 KCNA5P22460 613 aa14.68□□□□□ -0.06
RPAIN-202ENST00000381208 SARSP49591 514 aaKnown RBP14.68□□□□□ -0.06
RPAIN-202ENST00000381208 CRYBB1P53674 252 aaPredicted RBP14.68□□□□□ -0.06
RPAIN-202ENST00000381208 TMEM62Q0P6H9 643 aa14.68□□□□□ -0.06
RPAIN-202ENST00000381208 NFX1Q12986 1120 aaKnown RBP14.68□□□□□ -0.06
RPAIN-202ENST00000381208 TOB2Q14106 344 aaPredicted RBP14.68□□□□□ -0.06
RPAIN-202ENST00000381208 COL19A1Q14993 1142 aa14.68□□□□□ -0.06
RPAIN-202ENST00000381208 MOXD1Q6UVY6 613 aa14.68□□□□□ -0.06
RPAIN-202ENST00000381208 ZBTB10Q96DT7 871 aa14.68□□□□□ -0.06
RPAIN-202ENST00000381208 NECAB3Q96P71 396 aaPredicted RBP14.68□□□□□ -0.06
RPAIN-202ENST00000381208 MAP7D2Q96T17 732 aa14.68□□□□□ -0.06
RPAIN-202ENST00000381208 DISC1Q9NRI5 854 aa14.68□□□□□ -0.06
RPAIN-202ENST00000381208 GABBR1Q9UBS5 961 aa14.68□□□□□ -0.06
RPAIN-202ENST00000381208 PCDHA4Q9UN74 947 aa14.68□□□□□ -0.06
RPAIN-202ENST00000381208 GTF3C3Q9Y5Q9 886 aa14.68□□□□□ -0.06
RPAIN-202ENST00000381208 DENND3A2RUS2 1198 aa14.67□□□□□ -0.06
RPAIN-202ENST00000381208 GAS7O60861 476 aa14.67□□□□□ -0.06
RPAIN-202ENST00000381208 C22orf31O95567 290 aa14.67□□□□□ -0.06
RPAIN-202ENST00000381208 LINC00271P0C7V0 271 aa14.67□□□□□ -0.06
RPAIN-202ENST00000381208 ATP4AP20648 1035 aa14.67□□□□□ -0.06
RPAIN-202ENST00000381208 CDC42EP1Q00587 391 aa14.67□□□□□ -0.06
RPAIN-202ENST00000381208 TCEAL5Q5H9L2 206 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms