RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 LAD1O00515 517 aa21.71■■□□□ 1.07
GTF3A-201ENST00000381140 STBD1O95210 358 aa21.71■■□□□ 1.07
GTF3A-201ENST00000381140 C22orf31O95567 290 aa21.71■■□□□ 1.07
GTF3A-201ENST00000381140 RFC2P35250 354 aa21.71■■□□□ 1.07
GTF3A-201ENST00000381140 TRAF7Q6Q0C0 670 aa21.71■■□□□ 1.07
GTF3A-201ENST00000381140 DTHD1Q6ZMT9 781 aa21.71■■□□□ 1.07
GTF3A-201ENST00000381140 ERMNQ8TAM6 284 aa21.71■■□□□ 1.07
GTF3A-201ENST00000381140 NEK9Q8TD19 979 aa21.71■■□□□ 1.07
GTF3A-201ENST00000381140 RNPC3Q96LT9 517 aaKnown RBP21.71■■□□□ 1.07
GTF3A-201ENST00000381140 A0A087WWV3 80 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 SMIM35A0A1B0GVV1 85 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 CAND2O75155 1236 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 SLITRK3O94933 977 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 FGBP02675 491 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 FXR2P51116 673 aaKnown RBP eCLIP21.7■■□□□ 1.06
GTF3A-201ENST00000381140 NPEPPSP55786 919 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 ATP2C1P98194 919 aaPredicted RBP21.7■■□□□ 1.06
GTF3A-201ENST00000381140 CEBPZQ03701 1054 aaKnown RBP21.7■■□□□ 1.06
GTF3A-201ENST00000381140 TBC1D8BQ0IIM8 1120 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 SF3A1Q15459 793 aaKnown RBP21.7■■□□□ 1.06
GTF3A-201ENST00000381140 TMEM240Q5SV17 173 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 PSRC1Q6PGN9 363 aaPredicted RBP21.7■■□□□ 1.06
GTF3A-201ENST00000381140 ANO5Q75V66 913 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 OTOP2Q7RTS6 562 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 LRRC71Q8N4P6 559 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 PPP1R16BQ96T49 567 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 NIFKQ9BYG3 293 aaKnown RBP21.7■■□□□ 1.06
GTF3A-201ENST00000381140 RAB34Q9BZG1 259 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 SUGCTQ9HAC7 445 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 LRWD1Q9UFC0 647 aa21.7■■□□□ 1.06
GTF3A-201ENST00000381140 M0QZ92 97 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 ZBTB39O15060 712 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 MAGEB2O15479 319 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 NBNO60934 754 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 YWHABP31946 246 aaKnown RBP21.69■■□□□ 1.06
GTF3A-201ENST00000381140 PRPHP41219 470 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 CLCN3P51790 818 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 MRPS6P82932 125 aaKnown RBP21.69■■□□□ 1.06
GTF3A-201ENST00000381140 MBTPS1Q14703 1052 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 IL17AQ16552 155 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 XKR9Q5GH70 373 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 EFCAB12Q6NXP0 572 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 C4orf19Q8IY42 314 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 CCDC43Q96MW1 224 aaKnown RBP21.69■■□□□ 1.06
GTF3A-201ENST00000381140 HSD17B14Q9BPX1 270 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 ZSCAN16Q9H4T2 348 aaPredicted RBP21.69■■□□□ 1.06
GTF3A-201ENST00000381140 CLIC4Q9Y696 253 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 CDY2AQ9Y6F7 541 aa21.69■■□□□ 1.06
GTF3A-201ENST00000381140 VWA3AA6NCI4 1184 aa21.68■■□□□ 1.06
GTF3A-201ENST00000381140 MED24O75448 989 aa21.68■■□□□ 1.06
GTF3A-201ENST00000381140 CHRNA1P02708 482 aa21.68■■□□□ 1.06
GTF3A-201ENST00000381140 CCT6AP40227 531 aaKnown RBP21.68■■□□□ 1.06
GTF3A-201ENST00000381140 PKP1Q13835 747 aa21.68■■□□□ 1.06
GTF3A-201ENST00000381140 GPNMBQ14956 572 aa21.68■■□□□ 1.06
GTF3A-201ENST00000381140 TARBP2Q15633 366 aaKnown RBP21.68■■□□□ 1.06
GTF3A-201ENST00000381140 FOXD4L6Q3SYB3 417 aaPredicted RBP21.68■■□□□ 1.06
GTF3A-201ENST00000381140 HABP4Q5JVS0 413 aaKnown RBP21.68■■□□□ 1.06
GTF3A-201ENST00000381140 FOXD4L3Q6VB84 417 aaPredicted RBP21.68■■□□□ 1.06
GTF3A-201ENST00000381140 OTUD6AQ7L8S5 288 aa21.68■■□□□ 1.06
GTF3A-201ENST00000381140 ZNF579Q8NAF0 562 aaKnown RBP21.68■■□□□ 1.06
GTF3A-201ENST00000381140 VWCEQ96DN2 955 aa21.68■■□□□ 1.06
GTF3A-201ENST00000381140 CEP170P1Q96L14 293 aa21.68■■□□□ 1.06
GTF3A-201ENST00000381140 BMP2KQ9NSY1 1161 aaPredicted RBP21.68■■□□□ 1.06
GTF3A-201ENST00000381140 GINS2Q9Y248 185 aa21.68■■□□□ 1.06
GTF3A-201ENST00000381140 MICAL3Q7RTP6 2002 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 PP2D1A8MPX8 630 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 ZBBXA8MT70 800 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 PARNO95453 639 aaKnown RBP21.67■■□□□ 1.06
GTF3A-201ENST00000381140 PFKMP08237 780 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 ZSCAN22P10073 491 aaPredicted RBP21.67■■□□□ 1.06
GTF3A-201ENST00000381140 IER5Q5VY09 327 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 RPAINQ86UA6 219 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 CATSPER3Q86XQ3 398 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 KIAA0319LQ8IZA0 1049 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 PIGOQ8TEQ8 1089 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 OSBPL7Q9BZF2 842 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 TUFT1Q9NNX1 390 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 CYP26B1Q9NR63 512 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 AKT3Q9Y243 479 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 TRPV2Q9Y5S1 764 aa21.67■■□□□ 1.06
GTF3A-201ENST00000381140 A0A1W2PPC1 479 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 BMP15O95972 392 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 VTNP04004 478 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 SPATA31C1P0DKV0 1188 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 GHRP10912 638 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 ACTN1P12814 892 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 TMOD1P28289 359 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 CDC25AP30304 524 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 FAM26DQ5JW98 314 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 HAUS3Q68CZ6 603 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 POTEGQ6S5H5 508 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 SNX29Q8TEQ0 813 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 MAP7D2Q96T17 732 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 POLR3CQ9BUI4 534 aaPredicted RBP21.66■■□□□ 1.06
GTF3A-201ENST00000381140 GBF1Q92538 1859 aa21.66■■□□□ 1.06
GTF3A-201ENST00000381140 RPLP2P05387 115 aaKnown RBP21.65■■□□□ 1.06
GTF3A-201ENST00000381140 POLGP54098 1239 aaPredicted RBP21.65■■□□□ 1.06
GTF3A-201ENST00000381140 NUCB2P80303 420 aa21.65■■□□□ 1.06
GTF3A-201ENST00000381140 MGAT3Q09327 533 aa21.65■■□□□ 1.06
GTF3A-201ENST00000381140 PDIA5Q14554 519 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms