RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 GINS2Q9Y248 185 aa19.9■□□□□ 0.78
HMGN1-203ENST00000380748 NOC2LQ9Y3T9 749 aaKnown RBP19.9■□□□□ 0.78
HMGN1-203ENST00000380748 SMIM35A0A1B0GVV1 85 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 DENND3A2RUS2 1198 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 C9IYK1 514 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 FRYLO94915 3013 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 LAG3P18627 525 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 PDE4AP27815 886 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 PLCB3Q01970 1234 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 MTMR1Q13613 665 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 PLCB4Q15147 1175 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 TMEM40Q8WWA1 233 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 MFSD1Q9H3U5 465 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 CDHR5Q9HBB8 845 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 RGS18Q9NS28 235 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 C1orf112Q9NSG2 853 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 UBIAD1Q9Y5Z9 338 aa19.89■□□□□ 0.77
HMGN1-203ENST00000380748 IFIT3O14879 490 aaKnown RBP19.88■□□□□ 0.77
HMGN1-203ENST00000380748 WEE2P0C1S8 567 aa19.88■□□□□ 0.77
HMGN1-203ENST00000380748 ARP10275 920 aa19.88■□□□□ 0.77
HMGN1-203ENST00000380748 PBX3P40426 434 aa19.88■□□□□ 0.77
HMGN1-203ENST00000380748 TPRNQ4KMQ1 711 aa19.88■□□□□ 0.77
HMGN1-203ENST00000380748 CWF19L1Q69YN2 538 aaKnown RBP19.88■□□□□ 0.77
HMGN1-203ENST00000380748 SLC24A5Q71RS6 500 aa19.88■□□□□ 0.77
HMGN1-203ENST00000380748 CASP10Q92851 521 aa19.88■□□□□ 0.77
HMGN1-203ENST00000380748 NECTIN4Q96NY8 510 aa19.88■□□□□ 0.77
HMGN1-203ENST00000380748 IL25Q9H293 177 aa19.88■□□□□ 0.77
HMGN1-203ENST00000380748 ADAM7Q9H2U9 754 aa19.88■□□□□ 0.77
HMGN1-203ENST00000380748 AZI2Q9H6S1 392 aa19.88■□□□□ 0.77
HMGN1-203ENST00000380748 JPH1Q9HDC5 661 aaPredicted RBP19.88■□□□□ 0.77
HMGN1-203ENST00000380748 NGRNQ9NPE2 291 aaKnown RBP19.88■□□□□ 0.77
HMGN1-203ENST00000380748 PUF60Q9UHX1 559 aaKnown RBP19.88■□□□□ 0.77
HMGN1-203ENST00000380748 HCFC2Q9Y5Z7 792 aa19.88■□□□□ 0.77
HMGN1-203ENST00000380748 RPS6KA5O75582 802 aa19.87■□□□□ 0.77
HMGN1-203ENST00000380748 CLCN5P51795 746 aa19.87■□□□□ 0.77
HMGN1-203ENST00000380748 CES5AQ6NT32 575 aa19.87■□□□□ 0.77
HMGN1-203ENST00000380748 MTHFD1LQ6UB35 978 aa19.87■□□□□ 0.77
HMGN1-203ENST00000380748 NME8Q8N427 588 aa19.87■□□□□ 0.77
HMGN1-203ENST00000380748 ST3GAL5Q9UNP4 418 aa19.87■□□□□ 0.77
HMGN1-203ENST00000380748 NCOR2Q9Y618 2525 aa19.87■□□□□ 0.77
HMGN1-203ENST00000380748 MED19A0JLT2 244 aaPredicted RBP19.86■□□□□ 0.77
HMGN1-203ENST00000380748 ITIH3Q06033 890 aa19.86■□□□□ 0.77
HMGN1-203ENST00000380748 LRRC55Q6ZSA7 311 aa19.86■□□□□ 0.77
HMGN1-203ENST00000380748 TMC7Q7Z402 723 aa19.86■□□□□ 0.77
HMGN1-203ENST00000380748 FLCNQ8NFG4 579 aa19.86■□□□□ 0.77
HMGN1-203ENST00000380748 ATP6V0A4Q9HBG4 840 aa19.86■□□□□ 0.77
HMGN1-203ENST00000380748 TMEM161AQ9NX61 479 aa19.86■□□□□ 0.77
HMGN1-203ENST00000380748 SLC9A2Q9UBY0 812 aa19.86■□□□□ 0.77
HMGN1-203ENST00000380748 LIMD1Q9UGP4 676 aa19.86■□□□□ 0.77
HMGN1-203ENST00000380748 CACNA1BQ00975 2339 aa19.85■□□□□ 0.77
HMGN1-203ENST00000380748 KLRC1P26715 233 aa19.85■□□□□ 0.77
HMGN1-203ENST00000380748 HDAC1Q13547 482 aaPredicted RBP19.85■□□□□ 0.77
HMGN1-203ENST00000380748 WTAPQ15007 396 aa19.85■□□□□ 0.77
HMGN1-203ENST00000380748 UBE2SQ16763 222 aa19.85■□□□□ 0.77
HMGN1-203ENST00000380748 KCNT2Q6UVM3 1135 aa19.85■□□□□ 0.77
HMGN1-203ENST00000380748 TDRD5Q8NAT2 981 aaKnown RBP19.85■□□□□ 0.77
HMGN1-203ENST00000380748 TNPO1Q92973 898 aaKnown RBP19.85■□□□□ 0.77
HMGN1-203ENST00000380748 RRP36Q96EU6 259 aaKnown RBP19.85■□□□□ 0.77
HMGN1-203ENST00000380748 PPP1R16BQ96T49 567 aa19.85■□□□□ 0.77
HMGN1-203ENST00000380748 SPZ1Q9BXG8 430 aa19.85■□□□□ 0.77
HMGN1-203ENST00000380748 JADE2Q9NQC1 790 aa19.85■□□□□ 0.77
HMGN1-203ENST00000380748 RNF216Q9NWF9 866 aaPredicted RBP19.85■□□□□ 0.77
HMGN1-203ENST00000380748 EPG5Q9HCE0 2579 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 ERICH2A1L162 156 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 PI15O43692 258 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 MTHFRP42898 656 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 STAT5BP51692 787 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 ACTR2P61160 394 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 FAM189BP81408 668 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 TRDNQ13061 729 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 RARS2Q5T160 578 aaKnown RBP19.84■□□□□ 0.77
HMGN1-203ENST00000380748 KANK3Q6NY19 840 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 PLPPR4Q7Z2D5 763 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 KIAA0319LQ8IZA0 1049 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 ZDHHC14Q8IZN3 488 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 C12orf76Q8N812 135 aaPredicted RBP19.84■□□□□ 0.77
HMGN1-203ENST00000380748 ZNF558Q96NG5 402 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 CASD1Q96PB1 797 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 TMEM117Q9H0C3 514 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 RNF19AQ9NV58 838 aa19.84■□□□□ 0.77
HMGN1-203ENST00000380748 C2orf71A6NGG8 1288 aa19.83■□□□□ 0.77
HMGN1-203ENST00000380748 HIP1O00291 1037 aa19.83■□□□□ 0.77
HMGN1-203ENST00000380748 CLASP2O75122 1294 aaKnown RBP19.83■□□□□ 0.77
HMGN1-203ENST00000380748 PPM1AP35813 382 aa19.83■□□□□ 0.77
HMGN1-203ENST00000380748 SMC1AQ14683 1233 aaKnown RBP19.83■□□□□ 0.77
HMGN1-203ENST00000380748 CATIPQ7Z7H3 387 aa19.83■□□□□ 0.77
HMGN1-203ENST00000380748 FAM228AQ86W67 206 aa19.83■□□□□ 0.77
HMGN1-203ENST00000380748 PLEKHM2Q8IWE5 1019 aa19.83■□□□□ 0.77
HMGN1-203ENST00000380748 MRPL43Q8N983 215 aaKnown RBP19.83■□□□□ 0.77
HMGN1-203ENST00000380748 RMDN1Q96DB5 314 aa19.83■□□□□ 0.77
HMGN1-203ENST00000380748 MYL10Q9BUA6 226 aa19.83■□□□□ 0.77
HMGN1-203ENST00000380748 ELAC1Q9H777 363 aaKnown RBP19.83■□□□□ 0.77
HMGN1-203ENST00000380748 PSTPIP2Q9H939 334 aa19.83■□□□□ 0.77
HMGN1-203ENST00000380748 SEC63Q9UGP8 760 aaKnown RBP19.83■□□□□ 0.77
HMGN1-203ENST00000380748 EVPLQ92817 2033 aa19.82■□□□□ 0.76
HMGN1-203ENST00000380748 GPR182O15218 404 aa19.82■□□□□ 0.76
HMGN1-203ENST00000380748 MAFGO15525 162 aa19.82■□□□□ 0.76
HMGN1-203ENST00000380748 NPR3P17342 541 aa19.82■□□□□ 0.76
HMGN1-203ENST00000380748 AOC1P19801 751 aa19.82■□□□□ 0.76
HMGN1-203ENST00000380748 KRT17Q04695 432 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms