RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 USP2O75604 605 aaPredicted RBP13.2□□□□□ -0.3
USP3-202ENST00000380324 CCNE2O96020 404 aa13.2□□□□□ -0.3
USP3-202ENST00000380324 EPB41P11171 864 aaKnown RBP13.2□□□□□ -0.3
USP3-202ENST00000380324 QARSP47897 775 aaKnown RBP13.2□□□□□ -0.3
USP3-202ENST00000380324 ZNF131P52739 623 aa13.2□□□□□ -0.3
USP3-202ENST00000380324 POLR2FP61218 127 aaKnown RBP13.2□□□□□ -0.3
USP3-202ENST00000380324 KRT83P78385 493 aa13.2□□□□□ -0.3
USP3-202ENST00000380324 MAP3K9P80192 1104 aa13.2□□□□□ -0.3
USP3-202ENST00000380324 SP4Q02446 784 aa13.2□□□□□ -0.3
USP3-202ENST00000380324 PPP2R3AQ06190 1150 aa13.2□□□□□ -0.3
USP3-202ENST00000380324 CATSPERGQ6ZRH7 1159 aa13.2□□□□□ -0.3
USP3-202ENST00000380324 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.2□□□□□ -0.3
USP3-202ENST00000380324 DAW1Q8N136 415 aa13.2□□□□□ -0.3
USP3-202ENST00000380324 TBC1D22BQ9NU19 505 aa13.2□□□□□ -0.3
USP3-202ENST00000380324 KCND2Q9NZV8 630 aa13.2□□□□□ -0.3
USP3-202ENST00000380324 FAM184BQ9ULE4 1060 aa13.2□□□□□ -0.3
USP3-202ENST00000380324 CTAGE9A4FU28 777 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 RCCD1A6NED2 376 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 SORBS3O60504 671 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 NOL4O94818 638 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 NR3C2P08235 984 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 GUCY2CP25092 1073 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 RPL13P26373 211 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 CCND2P30279 289 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 YWHABP31946 246 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 RARRES1P49788 294 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 KIF11P52732 1056 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 OAZ1P54368 228 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 MAPK7Q13164 816 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 TDRD12Q587J7 1177 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 NOL9Q5SY16 702 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 TREML2Q5T2D2 321 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 PDXDC1Q6P996 788 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 MTERF4Q7Z6M4 381 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 SULF1Q8IWU6 871 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 CCDC170Q8IYT3 715 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 JAKMIP2Q96AA8 810 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 ACAD9Q9H845 621 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 A1CFQ9NQ94 594 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 CEP72Q9P209 647 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 SEL1LQ9UBV2 794 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 EIF3CLB5ME19 914 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 ZNF263O14978 683 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 TFRCP02786 760 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 HNRNPH3P31942 346 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 EIF4A3P38919 411 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 SPA17Q15506 151 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 PLA2G4FQ68DD2 849 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 ZNF720Q7Z2F6 126 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 FRMD5Q7Z6J6 570 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 SAMD3Q8N6K7 520 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 DCPSQ96C86 337 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 MAP7D2Q96T17 732 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 EIF3CQ99613 913 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 LACRTQ9GZZ8 138 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 HAUS4Q9H6D7 363 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 ADARB2Q9NS39 739 aaKnown RBP13.19□□□□□ -0.3
USP3-202ENST00000380324 ADAMTS5Q9UNA0 930 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 LOC285556D6RIA3 1793 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 PAPPA2Q9BXP8 1791 aa13.19□□□□□ -0.3
USP3-202ENST00000380324 MACROD2A1Z1Q3 448 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 WDR64B1ANS9 1081 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 AKR1B10O60218 316 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 TADA3O75528 432 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 AFPP02771 609 aaKnown RBP13.18□□□□□ -0.3
USP3-202ENST00000380324 ACTN1P12814 892 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 CYP2J2P51589 502 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 CDK17Q00537 523 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 ARID5AQ03989 594 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 RAPGEF1Q13905 1077 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 ENOX2Q16206 610 aaKnown RBP13.18□□□□□ -0.3
USP3-202ENST00000380324 STXBP4Q6ZWJ1 553 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 HS2ST1Q7LGA3 356 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 NAPGQ99747 312 aaPredicted RBP13.18□□□□□ -0.3
USP3-202ENST00000380324 PDCL3Q9H2J4 239 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 CYP39A1Q9NYL5 469 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 MYH10P35580 1976 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 BACH1O14867 736 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 NLRX1Q86UT6 975 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 VSIG10LQ86VR7 867 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 SYCP3Q8IZU3 236 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 NSUN6Q8TEA1 469 aaKnown RBP13.18□□□□□ -0.3
USP3-202ENST00000380324 UBXN4Q92575 508 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 IFIH1Q9BYX4 1025 aaKnown RBP13.18□□□□□ -0.3
USP3-202ENST00000380324 GPRC5CQ9NQ84 441 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 CSADQ9Y600 493 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 DUSP10Q9Y6W6 482 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 MYH9P35579 1960 aaKnown RBP13.18□□□□□ -0.3
USP3-202ENST00000380324 ARID2Q68CP9 1835 aa13.18□□□□□ -0.3
USP3-202ENST00000380324 SLC16A3O15427 465 aaKnown RBP13.17□□□□□ -0.3
USP3-202ENST00000380324 KRT86O43790 486 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 SLC9A1P19634 815 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 JAK3P52333 1124 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 KRT76Q01546 638 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 FBXO38Q6PIJ6 1188 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 FAM186BQ8IYM0 893 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 SLC35C1Q96A29 364 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 GBP3Q9H0R5 595 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 AGPAT3Q9NRZ7 376 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 CGNQ9P2M7 1197 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms