RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 PGRMC1O00264 195 aaKnown RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 GNA14O95837 355 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 FGGP02679 453 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 PLCG2P16885 1265 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 NOVP48745 357 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 MAGOHP61326 146 aaKnown RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 DHX9Q08211 1270 aaKnown RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 LLGL1Q15334 1064 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 DOK7Q18PE1 504 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 KNOP1Q1ED39 458 aaKnown RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 MCTP2Q6DN12 878 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 FAM196AQ6ZSG2 479 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 DHX37Q8IY37 1157 aaKnown RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 CERS5Q8N5B7 392 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 GLG1Q92896 1179 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 MAGOHBQ96A72 148 aaKnown RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 CYFIP2Q96F07 1278 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 SIX2Q9NPC8 291 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 SERPINB13Q9UIV8 391 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 PPP1R9AQ9ULJ8 1098 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 ATP8A1Q9Y2Q0 1164 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 KDM3AQ9Y4C1 1321 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 PHF20L1A8MW92 1017 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 HMGB1P1B2RPK0 211 aaPredicted RBP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 FAM86B1E9PN63 330 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 CHMP2AO43633 222 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 NR3C1P04150 777 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 FAM86B2P0C5J1 330 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 SPATA31C1P0DKV0 1188 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 ZBTB48P10074 688 aaPredicted RBP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 IL1R1P14778 569 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 GALCP54803 685 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 MARSP56192 900 aaKnown RBP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 EPHA7Q15375 998 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 PALB2Q86YC2 1186 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 CD302Q8IX05 232 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 TBC1D16Q8TBP0 767 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 JPH2Q9BR39 696 aaPredicted RBP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 GOPCQ9HD26 462 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 KCNMB3Q9NPA1 279 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 PLCB1Q9NQ66 1216 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 USP40Q9NVE5 1235 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 TAS2R14Q9NYV8 317 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 ATF5Q9Y2D1 282 aaPredicted RBP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 ASTN1O14525 1302 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 NHSQ6T4R5 1651 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 ADAMTSL1Q8N6G6 1762 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 IGKV6D-41A0A0C4DH26 115 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 hCG_1984214I3L0E3 225 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 BUB1BO60566 1050 aaPredicted RBP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 LRRN2O75325 713 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 FAM107AO95990 144 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 H2AFZP0C0S5 128 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 NMT1P30419 496 aaKnown RBP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 SPIRE1Q08AE8 756 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 IKQ13123 557 aaPredicted RBP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 KRT71Q3SY84 523 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 HYIQ5T013 277 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 TRAPPC3LQ5T215 181 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 H2AFVQ71UI9 128 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 CNPY4Q8N129 248 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 ZNF713Q8N859 430 aaPredicted RBP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 PRPF38AQ8NAV1 312 aaKnown RBP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 RDH13Q8NBN7 331 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 LNX1Q8TBB1 728 aaPredicted RBP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 SLC35C1Q96A29 364 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 ERVK-5Q9HDB9 667 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 DDX20Q9UHI6 824 aaKnown RBP9.51□□□□□ -0.89
TRIM6-203ENST00000380107 GAKO14976 1311 aa9.51□□□□□ -0.89
TRIM6-203ENST00000380107 LOC102724159A0A0B4J2E5 919 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 MEIS2O14770 477 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 EVI5O60447 810 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 FLOT1O75955 427 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 SHBGP04278 402 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 TRIM49P0CI25 452 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 TRIM49CP0CI26 452 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 KCNA4P22459 653 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 UBXN2AP68543 259 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 ARHGAP4P98171 946 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 CTTNQ14247 550 aaKnown RBP9.5□□□□□ -0.89
TRIM6-203ENST00000380107 PLS1Q14651 629 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 SEPT2Q15019 361 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 PWP2Q15269 919 aaKnown RBP9.5□□□□□ -0.89
TRIM6-203ENST00000380107 ARHGAP44Q17R89 818 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 DCAF12L1Q5VU92 463 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 NT5DC3Q86UY8 548 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 SUGP1Q8IWZ8 645 aaKnown RBP9.5□□□□□ -0.89
TRIM6-203ENST00000380107 CCDC13Q8IYE1 715 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 ACTRT1Q8TDG2 376 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 ARHGEF26Q96DR7 871 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 C8orf37Q96NL8 207 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 TMOD4Q9NZQ9 345 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 SLC12A6Q9UHW9 1150 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 DNM3Q9UQ16 869 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 COL24A1Q17RW2 1714 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 TLDC2A0PJX2 215 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 FRMD3A2A2Y4 597 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 EML1O00423 815 aa9.5□□□□□ -0.89
TRIM6-203ENST00000380107 EEF2P13639 858 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms