RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TTBK2Q6IQ55 1244 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 ANKRD23Q86SG2 305 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 GDAP1Q8TB36 358 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 DSCC1Q9BVC3 393 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 FAN1Q9Y2M0 1017 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 GSTTP1A0A1W2PQM5 241 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 AGRPO00253 132 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 WEE1P30291 646 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 GNG11P61952 73 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 YWHAEP62258 255 aaKnown RBP7.13□□□□□ -1.27
NEDD9-202ENST00000379446 RPS6P62753 249 aaKnown RBP7.13□□□□□ -1.27
NEDD9-202ENST00000379446 ADCY1Q08828 1119 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 ZMYM1Q5SVZ6 1142 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 MYSM1Q5VVJ2 828 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 OTOP1Q7RTM1 612 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 TEX2Q8IWB9 1127 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 TBC1D22BQ9NU19 505 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 RMND1Q9NWS8 449 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 RCOR1Q9UKL0 485 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 PCDHA6Q9UN73 950 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 PCDHA8Q9Y5H6 950 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 NMT2O60551 498 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 JAK3P52333 1124 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 UBXN2BQ14CS0 331 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 FBXO33Q7Z6M2 555 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 FAM114A1Q8IWE2 563 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 C12orf50Q8NA57 414 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-202ENST00000379446 MKNK1Q9BUB5 465 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 NT5C3AQ9H0P0 336 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-202ENST00000379446 DDX20Q9UHI6 824 aaKnown RBP7.13□□□□□ -1.27
NEDD9-202ENST00000379446 MYO6Q9UM54 1294 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 ROBO1Q9Y6N7 1651 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 TMCO5BA8MYB1 307 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 H3BRB1 525 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 CBFA2T2O43439 604 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 SLC4A1P02730 911 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 ALDH2P05091 517 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 ZNF286BP0CG31 522 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 EN2P19622 333 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-202ENST00000379446 AVPR1AP37288 418 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 KCNB1Q14721 858 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 IQUBQ8NA54 791 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 BANK1Q8NDB2 785 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 BHMTQ93088 406 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 CLIC6Q96NY7 704 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 TUT1Q9H6E5 874 aaKnown RBP7.13□□□□□ -1.27
NEDD9-202ENST00000379446 SETD4Q9NVD3 440 aa7.13□□□□□ -1.27
NEDD9-202ENST00000379446 LSM7Q9UK45 103 aaKnown RBP7.13□□□□□ -1.27
NEDD9-202ENST00000379446 MON2Q7Z3U7 1717 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 SLIT1O75093 1534 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 TTLL13PA6NNM8 815 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 XYLBO75191 536 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 PFKFB1P16118 471 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 PTGER2P43116 358 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 CTTNQ14247 550 aaKnown RBP7.12□□□□□ -1.27
NEDD9-202ENST00000379446 POSTNQ15063 836 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 COL13A1Q5TAT6 717 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-202ENST00000379446 SCYL2Q6P3W7 929 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 KIAA1328Q86T90 577 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 SKA2Q8WVK7 121 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-202ENST00000379446 KIAA1468Q9P260 1216 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 SUCLA2Q9P2R7 463 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-202ENST00000379446 FEZ2Q9UHY8 353 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-202ENST00000379446 SH3BP1Q9Y3L3 701 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 TCHHQ07283 1943 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 MAGEB2O15479 319 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 SH3BP5O60239 455 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 DDAH1O94760 285 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 CLTBP09497 229 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 ARL4DP49703 201 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 BCAR1P56945 870 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 FANCCQ00597 558 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 CYP27A1Q02318 531 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 DMWDQ09019 674 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 PNOCQ13519 176 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 ITGA7Q13683 1181 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 PLPP4Q5VZY2 271 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 ZNF449Q6P9G9 518 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 RASAL3Q86YV0 1011 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 SIX6OS1Q8N1H7 587 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 ANKRD7Q92527 254 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 SH2D3AQ9BRG2 576 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 CCDC113Q9H0I3 377 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 KIAA1024Q9UPX6 916 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 IPPQ9Y573 584 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 ARHGAP23Q9P227 1491 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 MYO1CO00159 1063 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 CYP2C18P33260 490 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 STX17P56962 302 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 EVCP57679 992 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 KRT40Q6A162 431 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 DCUN1D2Q6PH85 259 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 PPP4R3CPQ6ZMV5 832 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 LRRC71Q8N4P6 559 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.12□□□□□ -1.27
NEDD9-202ENST00000379446 BEST2Q8NFU1 509 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 ZNF653Q96CK0 615 aa7.12□□□□□ -1.27
NEDD9-202ENST00000379446 MAK16Q9BXY0 300 aaKnown RBP7.12□□□□□ -1.27
NEDD9-202ENST00000379446 MIR1-1HGQ9H1L0 117 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms