RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 NBPF26B4DH59 902 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 PSMA4P25789 261 aaKnown RBP12□□□□□ -0.49
PTCHD1-201ENST00000379361 FAM47AQ5JRC9 791 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 C6orf118Q5T5N4 469 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 CHMP1BQ7LBR1 199 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 TSEN34Q9BSV6 310 aaKnown RBP12□□□□□ -0.49
PTCHD1-201ENST00000379361 ASNSD1Q9NWL6 643 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 ZNF197O14709 1029 aa12□□□□□ -0.49
PTCHD1-201ENST00000379361 DPYDQ12882 1025 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 ZNF654Q8IZM8 581 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 LRRC47Q8N1G4 583 aaKnown RBP11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 FAM167AQ96KS9 214 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 INTS9Q9NV88 658 aaKnown RBP11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 PEX19P40855 299 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 TBC1D9BQ66K14 1250 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 DDX53Q86TM3 631 aaKnown RBP11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 KBTBD3Q8NAB2 608 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 HIF1AQ16665 826 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 ENAHQ8N8S7 591 aaPredicted RBP11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 G3BP2Q9UN86 482 aaKnown RBP11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 ARMC6Q6NXE6 501 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 FBXO18Q8NFZ0 1043 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 KIAA1024Q9UPX6 916 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 ERVV-2B6SEH9 535 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 TOMM70O94826 608 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 ALDH1A1P00352 501 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 TTC17Q96AE7 1141 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 KRCC1Q9NPI7 259 aaPredicted RBP11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 TRPC5Q9UL62 973 aaPredicted RBP11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 KRT37O76014 449 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 MXI1P50539 228 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 RARS2Q5T160 578 aaKnown RBP11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 SLFN13Q68D06 897 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 OR6B3Q8NGW1 331 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 PLEKHA4Q9H4M7 779 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 SLC52A2Q9HAB3 445 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 SLC39A2Q9NP94 309 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 GTPBP6O43824 516 aaPredicted RBP11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 TRAF3IP3Q9Y228 551 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 LRRIQ3A6PVS8 624 aaPredicted RBP11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 CCDC15Q0P6D6 951 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 KYAT1Q16773 422 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 KSR1Q8IVT5 923 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 PDIK1LQ8N165 341 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 ALDH1A2O94788 518 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 CCDC159P0C7I6 412 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 ATP1A2P50993 1020 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 TMC4Q7Z404 712 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 SUPT3HO75486 399 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 CENPPQ6IPU0 288 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 SCFD1Q8WVM8 642 aa11.99□□□□□ -0.49
PTCHD1-201ENST00000379361 IKBKBO14920 756 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 BCAMP50895 628 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 NR1H3Q13133 447 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 DEPDC1Q5TB30 811 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 KRT40Q6A162 431 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 TJP2Q9UDY2 1190 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 PALD1Q9ULE6 856 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 GCC2Q8IWJ2 1684 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 NCALDP61601 193 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 GABPB1Q06547 395 aaPredicted RBP11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 NR2F2P24468 414 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 ZNF274Q96GC6 653 aaPredicted RBP11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 EML4Q9HC35 981 aaKnown RBP11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 TEX28O15482 410 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 ARL4CP56559 192 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 TRIM48Q8IWZ4 208 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 EXD1Q8NHP7 514 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 SYCP2Q9BX26 1530 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 SCN4BQ8IWT1 228 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 ABCC12Q96J65 1359 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 CFAP69A5D8W1 941 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 LRRN2O75325 713 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 DHX36Q9H2U1 1008 aaKnown RBP11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 LRRC53A6NM62 1247 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 H0Y626 953 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 TRIM16O95361 564 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 U2AF2P26368 475 aaKnown RBP eCLIP11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 DCAF4L1Q3SXM0 396 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 HSPH1Q92598 858 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 GOLGA8SH3BPF8 625 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 CENPAP49450 140 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 PNOCQ13519 176 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 PTPROQ16827 1216 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 IRAK1BP1Q5VVH5 260 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 SDE2Q6IQ49 451 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 NHEJ1Q9H9Q4 299 aaPredicted RBP11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 XDHP47989 1333 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 ANO4Q32M45 955 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 TWF2Q6IBS0 349 aaKnown RBP11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 TAS2R42Q7RTR8 314 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 GCOM2Q9BZD3 368 aaPredicted RBP11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 INTUQ9ULD6 942 aa11.98□□□□□ -0.49
PTCHD1-201ENST00000379361 CYP4F22Q6NT55 531 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 AK8Q96MA6 479 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 ZMYND12Q9H0C1 365 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 SNX5Q9Y5X3 404 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 ZNF518AQ6AHZ1 1483 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 TBC1D12O60347 775 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms