RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TMEM260Q9NX78 707 aa20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 NOC2LQ9Y3T9 749 aaKnown RBP20.3■□□□□ 0.84
PDLIM4-202ENST00000379018 FGF18O76093 207 aa20.29■□□□□ 0.84
PDLIM4-202ENST00000379018 KLRC1P26715 233 aa20.29■□□□□ 0.84
PDLIM4-202ENST00000379018 NAPAP54920 295 aa20.29■□□□□ 0.84
PDLIM4-202ENST00000379018 ITGB3BPQ13352 177 aaPredicted RBP20.29■□□□□ 0.84
PDLIM4-202ENST00000379018 TMTC3Q6ZXV5 915 aa20.29■□□□□ 0.84
PDLIM4-202ENST00000379018 BMP8AQ7Z5Y6 402 aa20.29■□□□□ 0.84
PDLIM4-202ENST00000379018 ZBTB33Q86T24 672 aa20.29■□□□□ 0.84
PDLIM4-202ENST00000379018 FBXL6Q8N531 539 aa20.29■□□□□ 0.84
PDLIM4-202ENST00000379018 NEK1Q96PY6 1258 aa20.29■□□□□ 0.84
PDLIM4-202ENST00000379018 ERVK-5Q9HDB9 667 aa20.29■□□□□ 0.84
PDLIM4-202ENST00000379018 KMT2EQ8IZD2 1858 aa20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 CALM1P0DP23 149 aa20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 CALM2P0DP24 149 aa20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 CALM3P0DP25 149 aa20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 VCPP55072 806 aaKnown RBP20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 ERVFC1P60507 584 aa20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 WWC2Q6AWC2 1192 aa20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 PLPPR4Q7Z2D5 763 aa20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 TMTC2Q8N394 836 aa20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 COLGALT1Q8NBJ5 622 aa20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 TMEM40Q8WWA1 233 aa20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 TMEM87BQ96K49 555 aa20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 ANO3Q9BYT9 981 aa20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 AGO4Q9HCK5 861 aaKnown RBP20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 TYW1Q9NV66 732 aaKnown RBP20.28■□□□□ 0.84
PDLIM4-202ENST00000379018 NFASCO94856 1347 aa20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 KDM3AQ9Y4C1 1321 aa20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 FGFR1P11362 822 aa20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 ZNF76P36508 570 aa20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 TECP42680 631 aa20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 SIGLEC14Q08ET2 396 aa20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 TCF15Q12870 199 aa20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 CBX2Q14781 532 aaPredicted RBP20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 DUSP6Q16828 381 aa20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 NME8Q8N427 588 aa20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 OSMRQ99650 979 aa20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 ENTPD7Q9NQZ7 604 aa20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 ST3GAL5Q9UNP4 418 aa20.27■□□□□ 0.84
PDLIM4-202ENST00000379018 ADCY7P51828 1080 aa20.26■□□□□ 0.83
PDLIM4-202ENST00000379018 UBE3AQ05086 875 aa20.26■□□□□ 0.83
PDLIM4-202ENST00000379018 KIZQ2M2Z5 673 aa20.26■□□□□ 0.83
PDLIM4-202ENST00000379018 CEP55Q53EZ4 464 aa20.26■□□□□ 0.83
PDLIM4-202ENST00000379018 FAM160B1Q5W0V3 765 aa20.26■□□□□ 0.83
PDLIM4-202ENST00000379018 FANCBQ8NB91 859 aa20.26■□□□□ 0.83
PDLIM4-202ENST00000379018 TSHZ2Q9NRE2 1034 aa20.26■□□□□ 0.83
PDLIM4-202ENST00000379018 C1orf112Q9NSG2 853 aa20.26■□□□□ 0.83
PDLIM4-202ENST00000379018 HBP1O60381 514 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 CCNE2O96020 404 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 SRGAP2BP0DMP2 458 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 PKN1Q16512 942 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 TYW1BQ6NUM6 668 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 PDXDC2PQ6P474 469 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 SLC24A5Q71RS6 500 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 CCDC60Q8IWA6 550 aaPredicted RBP20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 CKAP2LQ8IYA6 745 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 KIAA0319LQ8IZA0 1049 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 METTL13Q8N6R0 699 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 ATP8B4Q8TF62 1192 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 ATP6V0A4Q9HBG4 840 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 ZNF302Q9NR11 478 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 RGS18Q9NS28 235 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 CNTNAP5Q8WYK1 1306 aa20.25■□□□□ 0.83
PDLIM4-202ENST00000379018 C9IYK1 514 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 SLC27A2O14975 620 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 VTNP04004 478 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 CA8P35219 290 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 PBX3P40426 434 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 LIFRP42702 1097 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 SYNE3Q6ZMZ3 975 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 FAM228AQ86W67 206 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 SUSD6Q92537 303 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 CDCA3Q99618 268 aaPredicted RBP20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 PRRX2Q99811 253 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 TCF25Q9BQ70 676 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 MTA3Q9BTC8 594 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 RIC8AQ9NPQ8 531 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 CDH22Q9UJ99 828 aa20.24■□□□□ 0.83
PDLIM4-202ENST00000379018 FSCN2O14926 492 aa20.23■□□□□ 0.83
PDLIM4-202ENST00000379018 GPR182O15218 404 aa20.23■□□□□ 0.83
PDLIM4-202ENST00000379018 PDGFBP01127 241 aaPredicted RBP20.23■□□□□ 0.83
PDLIM4-202ENST00000379018 ATF7P17544 494 aaPredicted RBP20.23■□□□□ 0.83
PDLIM4-202ENST00000379018 LAG3P18627 525 aa20.23■□□□□ 0.83
PDLIM4-202ENST00000379018 PTPN21Q16825 1174 aa20.23■□□□□ 0.83
PDLIM4-202ENST00000379018 ODR4Q5SWX8 454 aa20.23■□□□□ 0.83
PDLIM4-202ENST00000379018 SWSAP1Q6NVH7 229 aa20.23■□□□□ 0.83
PDLIM4-202ENST00000379018 ANKRD54Q6NXT1 300 aa20.23■□□□□ 0.83
PDLIM4-202ENST00000379018 RNF169Q8NCN4 708 aa20.23■□□□□ 0.83
PDLIM4-202ENST00000379018 ATOH1Q92858 354 aaPredicted RBP20.23■□□□□ 0.83
PDLIM4-202ENST00000379018 CWH43Q9H720 699 aa20.23■□□□□ 0.83
PDLIM4-202ENST00000379018 HIDE1A8MVS5 230 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 GFRA3O60609 400 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 ATG7O95352 703 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 SLC26A2P50443 739 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 ZNF484Q5JVG2 852 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 JAKMIP3Q5VZ66 844 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 CREB3L3Q68CJ9 461 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 MIS18BP1Q6P0N0 1132 aa20.22■□□□□ 0.83
PDLIM4-202ENST00000379018 ABHD15Q6UXT9 468 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms