RNA–Protein interactions for RNA: ENST00000378247.7

SPIRE2-201, Transcript of spire type actin nucleation factor 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPIRE2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-201ENST00000378247 TTBK2Q6IQ55 1244 aa20.52■□□□□ 0.88
SPIRE2-201ENST00000378247 FBXO25Q8TCJ0 367 aa20.52■□□□□ 0.88
SPIRE2-201ENST00000378247 DNAJC19Q96DA6 116 aa20.52■□□□□ 0.88
SPIRE2-201ENST00000378247 FAM167BQ9BTA0 163 aa20.52■□□□□ 0.88
SPIRE2-201ENST00000378247 USP17L15C9J2P7 530 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 USP17L13C9JLJ4 530 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 USP17L11C9JVI0 530 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 USP17L18D6R9N7 530 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 USP17L22D6RA61 530 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 USP17L17D6RBQ6 530 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 USP17L19D6RCP7 530 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 USP17L20D6RJB6 530 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 LDHBP07195 334 aaKnown RBP20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 SNAP25P60880 206 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 USP17L24Q0WX57 530 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 EXOC3L4Q17RC7 722 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 USP17L6PQ6QN14 398 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 CCT6BQ92526 530 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 ACTR5Q9H9F9 607 aaPredicted RBP20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 PVALEFA0A1B0GWK0 134 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 ATP6V1G2O95670 118 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 CUL1Q13616 776 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 BARGINQ6ZT62 677 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 IRF2BP2Q7Z5L9 587 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 RUBCNQ92622 972 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 DDX25Q9UHL0 483 aaKnown RBP20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 LRRN2O75325 713 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 CREB1P16220 341 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 PSMC6P62333 389 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 TRIM59Q8IWR1 403 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 GDAP1Q8TB36 358 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 SEMA4AQ9H3S1 761 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 MAGEF1Q9HAY2 307 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 INTS9Q9NV88 658 aaKnown RBP20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 AGAP1Q9UPQ3 857 aa20.51■□□□□ 0.87
SPIRE2-201ENST00000378247 CETN3O15182 167 aa20.5■□□□□ 0.87
SPIRE2-201ENST00000378247 H2AFZP0C0S5 128 aa20.5■□□□□ 0.87
SPIRE2-201ENST00000378247 RPS8P62241 208 aaKnown RBP20.5■□□□□ 0.87
SPIRE2-201ENST00000378247 PLS1Q14651 629 aa20.5■□□□□ 0.87
SPIRE2-201ENST00000378247 H2AFVQ71UI9 128 aa20.5■□□□□ 0.87
SPIRE2-201ENST00000378247 NBPF5PQ86XG9 351 aaPredicted RBP20.5■□□□□ 0.87
SPIRE2-201ENST00000378247 SPICE1Q8N0Z3 855 aa20.5■□□□□ 0.87
SPIRE2-201ENST00000378247 CCDC26Q8TAB7 109 aa20.5■□□□□ 0.87
SPIRE2-201ENST00000378247 RSPH10B2B2RC85 870 aa20.5■□□□□ 0.87
SPIRE2-201ENST00000378247 RSPH10BP0C881 870 aa20.5■□□□□ 0.87
SPIRE2-201ENST00000378247 TBC1D9BQ66K14 1250 aa20.5■□□□□ 0.87
SPIRE2-201ENST00000378247 CCT8L1PA6NM43 557 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 RGS16O15492 202 aaPredicted RBP20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 EDIL3O43854 480 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 PLA2G4BP0C869 781 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 PCP11498 1178 aaKnown RBP20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 PLCG2P16885 1265 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 CDK8P49336 464 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 GALCP54803 685 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 MTMR9Q96QG7 549 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 RAB34Q9BZG1 259 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 ARMCX3Q9UH62 379 aaPredicted RBP20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 COL16A1Q07092 1604 aaPredicted RBP20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 RBAK-RBAKDNI3L0D1 243 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 PPP1R2P41236 205 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 KCNJ1P48048 391 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 ADCY7P51828 1080 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 BIRC3Q13489 604 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 MEX3CQ5U5Q3 659 aaKnown RBP20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 SEPT14Q6ZU15 432 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 MICAL1Q8TDZ2 1067 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 C18orf8Q96DM3 657 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 RIC8AQ9NPQ8 531 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 BSDC1Q9NW68 430 aaPredicted RBP20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 USP21Q9UK80 565 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 NUP98P52948 1817 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 DIAPH2O60879 1101 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 SETDB2Q96T68 719 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 ADAM33Q9BZ11 813 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 GANQ9H2C0 597 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 TMEM59LQ9UK28 342 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 IGSF9BQ9UPX0 1349 aa20.49■□□□□ 0.87
SPIRE2-201ENST00000378247 GCFC2P16383 781 aaKnown RBP20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 TNIP1Q15025 636 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 KCTD1Q719H9 257 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 FBXO33Q7Z6M2 555 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 ANKS4BQ8N8V4 417 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 KCNK9Q9NPC2 374 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 GCNT4Q9P109 453 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 SAMD15Q9P1V8 674 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 STK17AQ9UEE5 414 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 ANP32DO95626 131 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 MYBP10242 640 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 RFC4P35249 363 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 DR1Q01658 176 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 SAMD1Q6SPF0 538 aaPredicted RBP20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 TAS2R14Q9NYV8 317 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 CCNL1Q9UK58 526 aaPredicted RBP20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 BCORQ6W2J9 1755 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 UBOX5O94941 541 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 DENND2CQ68D51 928 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 ZNF746Q6NUN9 644 aaPredicted RBP20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 LRIG3Q6UXM1 1119 aa20.48■□□□□ 0.87
SPIRE2-201ENST00000378247 PALB2Q86YC2 1186 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms