RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 G3BP2Q9UN86 482 aaKnown RBP12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 CFAP74Q9C0B2 1584 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 NEDD4P46934 1319 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 MYL1P05976 194 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 PHEXP78562 749 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 GFPT1Q06210 699 aaPredicted RBP12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 PRAMEF18Q5VWM3 479 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 KCNV2Q8TDN2 545 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 CYTH2Q99418 400 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 ZFYVE16Q7Z3T8 1539 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 SAMD9LQ8IVG5 1584 aa12.89□□□□□ -0.35
PCDHA9-201ENST00000378122 MAPK13O15264 365 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 PPWD1Q96BP3 646 aaKnown RBP12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 ZBTB1Q9Y2K1 713 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 GPC4O75487 556 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 EIF3BP55884 814 aaKnown RBP12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 PTPN12Q05209 780 aaKnown RBP12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 HP1BP3Q5SSJ5 553 aaPredicted RBP12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 MAP7D3Q8IWC1 876 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 AMNQ9BXJ7 453 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 CEP170Q5SW79 1584 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 ANXA13P27216 316 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 ADCY2Q08462 1091 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 MIS12Q9H081 205 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 NCK2O43639 380 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 FGGP02679 453 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 IPO11Q9UI26 975 aaKnown RBP12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 TBC1D12O60347 775 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 SLC9A5Q14940 896 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 ZFYVE28Q9HCC9 887 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 SLC8A2Q9UPR5 921 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 GOLGA8IPA6NC78 632 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 GOLGA8JA6NMD2 632 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 FOSP01100 380 aaPredicted RBP12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 ACTN3Q08043 901 aaPredicted RBP12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 YIPF3Q9GZM5 350 aa12.88□□□□□ -0.35
PCDHA9-201ENST00000378122 S100BP04271 92 aaPredicted RBP12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 ESRRAP11474 423 aaPredicted RBP12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 CC2D2BQ6DHV5 1058 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 EMBQ6PCB8 327 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 HSPH1Q92598 858 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 GINM1Q9NU53 330 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 LAMC1P11047 1609 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 IFNAR1P17181 557 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 NUGGCQ68CJ6 796 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 ST13P4Q8IZP2 240 aaPredicted RBP12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 CCHCR1Q8TD31 782 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 BPIFA3Q9BQP9 254 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 ZWILCHQ9H900 591 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 ECE2O60344 883 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 PDHA1P08559 390 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 INPP1P49441 399 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 CTTNQ14247 550 aaKnown RBP12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 RNF219Q5W0B1 726 aaPredicted RBP12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 DNAJC24Q6P3W2 148 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 ZC3H18Q86VM9 953 aaKnown RBP12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 CCNYQ8ND76 341 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 CCDC68Q9H2F9 335 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 EIF4E1BA6NMX2 242 aaKnown RBP12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 STX1BP61266 288 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 RAB44Q7Z6P3 723 aaPredicted RBP12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 GNGT2O14610 69 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 HDAC6Q9UBN7 1215 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 IGSF1Q8N6C5 1336 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 ARAP3Q8WWN8 1544 aa12.87□□□□□ -0.35
PCDHA9-201ENST00000378122 SFI1A8K8P3 1242 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 CYP2B6P20813 491 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 ATN1P54259 1190 aaPredicted RBP12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 ERLEC1Q96DZ1 483 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 TMEM206Q9H813 350 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 TMEM2Q9UHN6 1383 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 NEMP1O14524 444 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 CFLARO15519 480 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 PARP9Q8IXQ6 854 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 NCAPGQ9BPX3 1015 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 ECT2Q9H8V3 914 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 ZCCHC17Q9NP64 241 aaKnown RBP12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 BAG5Q9UL15 447 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 GOLGA8QA0A0J9YX86 632 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 GOLGA8OA6NCC3 632 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 GOLGA8NF8WBI6 632 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 PPFIA2O75334 1257 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 CD58P19256 250 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 CCND2P30279 289 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 KCTD17Q8N5Z5 321 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 SLC38A10Q9HBR0 1119 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 ESRRGP62508 458 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 MIS18BP1Q6P0N0 1132 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 SCARA5Q6ZMJ2 495 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 CALN1Q9BXU9 219 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 SRGAP2CP0DJJ0 459 aa12.86□□□□□ -0.35
PCDHA9-201ENST00000378122 H0Y3Z8 333 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 GSTA4O15217 222 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 LMNAP02545 664 aaKnown RBP12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 SRGAP2BP0DMP2 458 aa12.85□□□□□ -0.35
PCDHA9-201ENST00000378122 ZBTB17Q13105 803 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms