RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CATSPER3Q86XQ3 398 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 KCTD17Q8N5Z5 321 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 USP28Q96RU2 1077 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 JPH2Q9BR39 696 aaPredicted RBP14.82□□□□□ -0.04
CKAP2-202ENST00000378034 TANC1Q9C0D5 1861 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 ANKEF1Q9NU02 776 aa14.82□□□□□ -0.04
CKAP2-202ENST00000378034 WRAP73Q9P2S5 460 aaPredicted RBP14.82□□□□□ -0.04
CKAP2-202ENST00000378034 UMODL1Q5DID0 1318 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 VWA3AA6NCI4 1184 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 IQCF3P0C7M6 154 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 LONP1P36776 959 aaKnown RBP14.81□□□□□ -0.04
CKAP2-202ENST00000378034 THPOP40225 353 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 NUCB2P80303 420 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 MDM2Q00987 491 aaPredicted RBP14.81□□□□□ -0.04
CKAP2-202ENST00000378034 FOXD4L5Q5VV16 416 aaPredicted RBP14.81□□□□□ -0.04
CKAP2-202ENST00000378034 RUFY4Q6ZNE9 571 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 LRRC8DQ7L1W4 858 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 ZNF710Q8N1W2 664 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 FOXD4L4Q8WXT5 416 aaPredicted RBP14.81□□□□□ -0.04
CKAP2-202ENST00000378034 WNT8BQ93098 351 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 NACC1Q96RE7 527 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 WNT8AQ9H1J5 351 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 CYP26B1Q9NR63 512 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 ATP6V1DQ9Y5K8 247 aa14.81□□□□□ -0.04
CKAP2-202ENST00000378034 MED24O75448 989 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 TMOD1P28289 359 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 CCT6AP40227 531 aaKnown RBP14.8□□□□□ -0.04
CKAP2-202ENST00000378034 TBC1D8BQ0IIM8 1120 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 MTERF2Q49AM1 385 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 FAM26DQ5JW98 314 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 RPUSD2Q8IZ73 545 aaKnown RBP14.8□□□□□ -0.04
CKAP2-202ENST00000378034 CEP89Q96ST8 783 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 FTOQ9C0B1 505 aaKnown RBP eCLIP14.8□□□□□ -0.04
CKAP2-202ENST00000378034 CFAP45Q9UL16 551 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 ZDHHC9Q9Y397 364 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 SRPRBQ9Y5M8 271 aaKnown RBP14.8□□□□□ -0.04
CKAP2-202ENST00000378034 RSPH10B2B2RC85 870 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 YEATS4O95619 227 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 PFKMP08237 780 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 RSPH10BP0C881 870 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 DDIT3P35638 169 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 RFC5P40937 340 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 CCL23P55773 120 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 ZNF618Q5T7W0 954 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 SNX29Q8TEQ0 813 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 DNAJB3Q8WWF6 145 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 CEP170P1Q96L14 293 aa14.8□□□□□ -0.04
CKAP2-202ENST00000378034 DBR1Q9UK59 544 aaKnown RBP14.8□□□□□ -0.04
CKAP2-202ENST00000378034 KDM3AQ9Y4C1 1321 aa14.79□□□□□ -0.04
CKAP2-202ENST00000378034 IGKV6-21A0A0C4DH24 114 aa14.79□□□□□ -0.04
CKAP2-202ENST00000378034 MAFO75444 373 aaPredicted RBP14.79□□□□□ -0.04
CKAP2-202ENST00000378034 CSF2RAP15509 400 aa14.79□□□□□ -0.04
CKAP2-202ENST00000378034 CEBPZQ03701 1054 aaKnown RBP14.79□□□□□ -0.04
CKAP2-202ENST00000378034 STK38Q15208 465 aa14.79□□□□□ -0.04
CKAP2-202ENST00000378034 XKR9Q5GH70 373 aa14.79□□□□□ -0.04
CKAP2-202ENST00000378034 IER5Q5VY09 327 aa14.79□□□□□ -0.04
CKAP2-202ENST00000378034 TRAF7Q6Q0C0 670 aa14.79□□□□□ -0.04
CKAP2-202ENST00000378034 LINC01465Q8N7H1 131 aa14.79□□□□□ -0.04
CKAP2-202ENST00000378034 LINC00301Q8NCQ3 95 aa14.79□□□□□ -0.04
CKAP2-202ENST00000378034 IL23AQ9NPF7 189 aa14.79□□□□□ -0.04
CKAP2-202ENST00000378034 CEP290O15078 2479 aa14.79□□□□□ -0.04
CKAP2-202ENST00000378034 ARID2Q68CP9 1835 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 GAS2O43903 313 aaKnown RBP14.78□□□□□ -0.04
CKAP2-202ENST00000378034 PPP6R2O75170 966 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 HYIQ5T013 277 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 PLA2G4FQ68DD2 849 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 EFCAB12Q6NXP0 572 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 KIAA0319LQ8IZA0 1049 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 METTL13Q8N6R0 699 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 SLC7A3Q8WY07 619 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 SCLYQ96I15 445 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 CCDC43Q96MW1 224 aaKnown RBP14.78□□□□□ -0.04
CKAP2-202ENST00000378034 UBE2OQ9C0C9 1292 aaKnown RBP14.78□□□□□ -0.04
CKAP2-202ENST00000378034 NT5C3AQ9H0P0 336 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 TFIP11Q9UBB9 837 aaKnown RBP14.78□□□□□ -0.04
CKAP2-202ENST00000378034 FBXO2Q9UK22 296 aaPredicted RBP14.78□□□□□ -0.04
CKAP2-202ENST00000378034 LOXHD1Q8IVV2 1947 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 EVPLQ92817 2033 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 TMEM150BA6NC51 233 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 M0QZ92 97 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 DNM2P50570 870 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 NPEPPSP55786 919 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 MRPS6P82932 125 aaKnown RBP14.78□□□□□ -0.04
CKAP2-202ENST00000378034 CDC42EP1Q00587 391 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 KRI1Q8N9T8 703 aaKnown RBP14.78□□□□□ -0.04
CKAP2-202ENST00000378034 ZBTB10Q96DT7 871 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 MAP7D2Q96T17 732 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 MMTAG2Q9BU76 263 aaKnown RBP14.78□□□□□ -0.04
CKAP2-202ENST00000378034 FAM49AQ9H0Q0 323 aaPredicted RBP14.78□□□□□ -0.04
CKAP2-202ENST00000378034 PRO3102Q9H379 93 aa14.78□□□□□ -0.04
CKAP2-202ENST00000378034 DHX33Q9H6R0 707 aaKnown RBP14.78□□□□□ -0.04
CKAP2-202ENST00000378034 A0A1W2PPC1 479 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 PP2D1A8MPX8 630 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 SPTLC2O15270 562 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 DGAT1O75907 488 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 CXCL10P02778 98 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 MARCKSP29966 332 aaPredicted RBP14.77□□□□□ -0.04
CKAP2-202ENST00000378034 UBA7P41226 1012 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 RARRES1P49788 294 aa14.77□□□□□ -0.04
CKAP2-202ENST00000378034 POLGP54098 1239 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms