RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 KCNH2Q12809 1159 aa15.11■□□□□ 0.01
SF1-205ENST00000377394 KCTD19Q17RG1 926 aaPredicted RBP15.11■□□□□ 0.01
SF1-205ENST00000377394 CDC42EP5Q6NZY7 148 aa15.11■□□□□ 0.01
SF1-205ENST00000377394 INPP4AQ96PE3 977 aaPredicted RBP15.11■□□□□ 0.01
SF1-205ENST00000377394 ANO3Q9BYT9 981 aa15.11■□□□□ 0.01
SF1-205ENST00000377394 COA1Q9GZY4 146 aa15.11■□□□□ 0.01
SF1-205ENST00000377394 DHX36Q9H2U1 1008 aaKnown RBP15.11■□□□□ 0.01
SF1-205ENST00000377394 PITPNM2Q9BZ72 1349 aa15.11■□□□□ 0.01
SF1-205ENST00000377394 KLHL30Q0D2K2 578 aa15.11■□□□□ 0.01
SF1-205ENST00000377394 KIAA0753Q2KHM9 967 aa15.11■□□□□ 0.01
SF1-205ENST00000377394 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
SF1-205ENST00000377394 IFT20Q8IY31 132 aa15.11■□□□□ 0.01
SF1-205ENST00000377394 CRYGNQ8WXF5 182 aa15.11■□□□□ 0.01
SF1-205ENST00000377394 P2RX7Q99572 595 aaKnown RBP15.11■□□□□ 0.01
SF1-205ENST00000377394 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.11■□□□□ 0.016e-6■■□□□ 11.9
SF1-205ENST00000377394 QSER1Q2KHR3 1735 aa15.11■□□□□ 0.01
SF1-205ENST00000377394 KLRG2A4D1S0 409 aaPredicted RBP15.1■□□□□ 0.01
SF1-205ENST00000377394 GRID2IPA4D2P6 1211 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 POTEFA5A3E0 1075 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 POTEIP0CG38 1075 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 CDC25CP30307 473 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 HOXD13P35453 343 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 SARNPP82979 210 aaKnown RBP15.1■□□□□ 0.01
SF1-205ENST00000377394 ASIC2Q16515 512 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 ANKRD20A8PQ5CZ79 823 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 POTEGQ6S5H5 508 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 POTEEQ6S8J3 1075 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 BCCIPQ9P287 314 aaKnown RBP eCLIP15.1■□□□□ 0.01
SF1-205ENST00000377394 PACSIN2Q9UNF0 486 aaPredicted RBP15.1■□□□□ 0.01
SF1-205ENST00000377394 PCDHA1Q9Y5I3 950 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 LRRC37AA6NMS7 1700 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 CETN3O15182 167 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 DNA2P51530 1060 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 MAP2K1Q02750 393 aaPredicted RBP15.1■□□□□ 0.01
SF1-205ENST00000377394 IRF2BP2Q7Z5L9 587 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 CATSPER3Q86XQ3 398 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 SP8Q8IXZ3 490 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 ZNF483Q8TF39 744 aaPredicted RBP15.1■□□□□ 0.01
SF1-205ENST00000377394 GLT8D2Q9H1C3 349 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 ATP6V0A4Q9HBG4 840 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 MEIS2O14770 477 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 IRF6O14896 467 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 HEXIM1O94992 359 aaKnown RBP15.1■□□□□ 0.01
SF1-205ENST00000377394 ACTN1P12814 892 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 NR2F2P24468 414 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 PEX19P40855 299 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 SCNN1DP51172 638 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 PSMC6P62333 389 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 NFIAQ12857 509 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 SF3A3Q12874 501 aaKnown RBP eCLIP15.1■□□□□ 0.014e-7■■■□□ 14.8
SF1-205ENST00000377394 GRIK3Q13003 919 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 ITGB3BPQ13352 177 aaPredicted RBP15.1■□□□□ 0.01
SF1-205ENST00000377394 GIT2Q14161 759 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 ENOX2Q16206 610 aaKnown RBP15.1■□□□□ 0.01
SF1-205ENST00000377394 APOBEC3HQ6NTF7 200 aaKnown RBP15.1■□□□□ 0.01
SF1-205ENST00000377394 ETNPPLQ8TBG4 499 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 DNAJC18Q9H819 358 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 KIF9Q9HAQ2 790 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 EPB41L5Q9HCM4 733 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 TRAF3IP3Q9Y228 551 aa15.1■□□□□ 0.01
SF1-205ENST00000377394 MYH4Q9Y623 1939 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 BTNL10A8MVZ5 291 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 KRT18P05783 430 aaKnown RBP15.09■□□□□ 0.01
SF1-205ENST00000377394 TMOD1P28289 359 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 GCKP35557 465 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 SCTRP47872 440 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 PTK2Q05397 1052 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 MOXD1Q6UVY6 613 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 ZFPM1Q8IX07 1006 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 SLFN12Q8IYM2 578 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 THOC1Q96FV9 657 aaKnown RBP15.09■□□□□ 0.01
SF1-205ENST00000377394 ATP6V1G3Q96LB4 118 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 HDAC9Q9UKV0 1011 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 PPEF1O14829 653 aaPredicted RBP15.09■□□□□ 0.01
SF1-205ENST00000377394 SPATA31C1P0DKV0 1188 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 SLC9A1P19634 815 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 IRX1P78414 480 aaPredicted RBP15.09■□□□□ 0.01
SF1-205ENST00000377394 GUCY2DQ02846 1103 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 SHROOM1Q2M3G4 852 aaPredicted RBP15.09■□□□□ 0.01
SF1-205ENST00000377394 FAM43BQ6ZT52 329 aaPredicted RBP15.09■□□□□ 0.01
SF1-205ENST00000377394 EPM2AIP1Q7L775 607 aaPredicted RBP15.09■□□□□ 0.01
SF1-205ENST00000377394 ZNF571Q7Z3V5 609 aaPredicted RBP15.09■□□□□ 0.01
SF1-205ENST00000377394 MAATS1Q7Z4T9 603 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 FRMD5Q7Z6J6 570 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 KRT12Q99456 494 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 ZHX3Q9H4I2 956 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 PLCB1Q9NQ66 1216 aa15.09■□□□□ 0.01
SF1-205ENST00000377394 KIF3CO14782 793 aa15.08■□□□□ 0.01
SF1-205ENST00000377394 HLA-DOAP06340 250 aa15.08■□□□□ 0.01
SF1-205ENST00000377394 CDC37Q16543 378 aaPredicted RBP15.08■□□□□ 0.01
SF1-205ENST00000377394 OR2W6PQ8NHA6 318 aa15.08■□□□□ 0.01
SF1-205ENST00000377394 MKL1Q969V6 931 aa15.08■□□□□ 0.01
SF1-205ENST00000377394 STAMBPL1Q96FJ0 436 aa15.08■□□□□ 0.01
SF1-205ENST00000377394 ACTR5Q9H9F9 607 aaPredicted RBP15.08■□□□□ 0.01
SF1-205ENST00000377394 TMEM59LQ9UK28 342 aa15.08■□□□□ 0.01
SF1-205ENST00000377394 UBR3Q6ZT12 1888 aa15.08■□□□□ 0
SF1-205ENST00000377394 ADAMTSL1Q8N6G6 1762 aa15.08■□□□□ 0
SF1-205ENST00000377394 EPS15P42566 896 aa15.08■□□□□ 0
SF1-205ENST00000377394 BYSLQ13895 437 aaKnown RBP15.08■□□□□ 0
SF1-205ENST00000377394 CASKIN2Q8WXE0 1202 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms