RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 MTMR2Q13614 643 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 KNOP1Q1ED39 458 aaKnown RBP19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 PPFIBP2Q8ND30 876 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 CCDC68Q9H2F9 335 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 PCDHA13Q9Y5I0 950 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 LGALS16A8MUM7 142 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 GRIN3BO60391 1043 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 KRT1P04264 644 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 RPS12P25398 132 aaKnown RBP19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 ALKBH5Q6P6C2 394 aaKnown RBP19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 SPATA24Q86W54 205 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 CCDC13Q8IYE1 715 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 ACRBPQ8NEB7 543 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 BPIFA3Q9BQP9 254 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 LXNQ9BS40 222 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 DAAM1Q9Y4D1 1078 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 SOWAHDA6NJG2 315 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 SGK1O00141 431 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 NDUFB10O96000 172 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 ANKRD42Q8N9B4 389 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 PCDHA10Q9Y5I2 948 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 ADGRB1O14514 1584 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 POTEFA5A3E0 1075 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 MFAP3LO75121 409 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 POTEIP0CG38 1075 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 SRGAP2BP0DMP2 458 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 PDIA5Q14554 519 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 SGO2Q562F6 1265 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 ANKRD20A3Q5VUR7 823 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 POTEGQ6S5H5 508 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 POTEEQ6S8J3 1075 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 TEX13BQ9BXU2 312 aa19.31■□□□□ 0.68
CLSTN1-202ENST00000377298 DENND3A2RUS2 1198 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 SLC16A4O15374 487 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 ANXA13P27216 316 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 SCARA5Q6ZMJ2 495 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 SDCCAG8Q86SQ7 713 aaPredicted RBP19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 GOLPH3LQ9H4A5 285 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 SCINQ9Y6U3 715 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 MCF2LO15068 1137 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 PRCPP42785 496 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 TKFCQ3LXA3 575 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 RHOT2Q8IXI1 618 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 MAD1L1Q9Y6D9 718 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 ZNF568Q3ZCX4 644 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 EIF2AK1Q9BQI3 630 aaKnown RBP19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 TROVE2P10155 538 aaKnown RBP eCLIP19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 MFSD14CQ5VZR4 134 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 GUF1Q8N442 669 aaKnown RBP19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 CEP72Q9P209 647 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 DNAJC12Q9UKB3 198 aa19.3■□□□□ 0.68
CLSTN1-202ENST00000377298 PRPSAP2O60256 369 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 ARHGAP24Q8N264 748 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 ZNF280CQ8ND82 737 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 SPATA33Q96N06 139 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 SPTLC3Q9NUV7 552 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 ZBTB12Q9Y330 459 aaPredicted RBP19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 GPR75-ASB3A0A0A6YYF3 556 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 GOLGA8CPA6NN73 597 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 OR6B3Q8NGW1 331 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 SPDYE16A6NNV3 312 aaPredicted RBP19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 PSMD14O00487 310 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 GARSP41250 739 aaKnown RBP19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 HDLBPQ00341 1268 aaKnown RBP19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 SPDYE2Q495Y8 402 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 NAALADL2Q58DX5 795 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 ERICH1Q86X53 443 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 ADAMTS1Q9UHI8 967 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 ARPP19P56211 112 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 GKAP1Q5VSY0 366 aaPredicted RBP19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 PPP4R1Q8TF05 950 aa19.29■□□□□ 0.68
CLSTN1-202ENST00000377298 ZNF131P52739 623 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 ELP3Q9H9T3 547 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 SLC9A2Q9UBY0 812 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 HACL1Q9UJ83 578 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 MOCS3O95396 460 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 ECEL1O95672 775 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 RASA1P20936 1047 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 CASP1P29466 404 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 YWHAGP61981 247 aaKnown RBP eCLIP19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 CCHCR1Q8TD31 782 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 RNF139Q8WU17 664 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 TUFT1Q9NNX1 390 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 PTPN22Q9Y2R2 807 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 VCPKMTQ9H867 229 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 CPSF3Q9UKF6 684 aaKnown RBP19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 PDS5AQ29RF7 1337 aaKnown RBP19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 KIF28PB7ZC32 967 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 DPEP1P16444 411 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 GUCY1A2P33402 732 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 TPD52P55327 224 aaPredicted RBP19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 MCUR1Q96AQ8 359 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 PHF20Q9BVI0 1012 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 TRIM49BA6NDI0 452 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 FTCDO95954 541 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 SLC10A5Q5PT55 438 aa19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 TWF2Q6IBS0 349 aaKnown RBP19.28■□□□□ 0.68
CLSTN1-202ENST00000377298 CAPN12Q6ZSI9 719 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms