RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 APOBEC2Q9Y235 224 aaKnown RBP13.34□□□□□ -0.27
VPS13A-204ENST00000376634 ZNF804BA4D1E1 1349 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 hCG_1984214I3L0E3 225 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 GYG2O15488 501 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 NNTQ13423 1086 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 ZNF713Q8N859 430 aaPredicted RBP13.34□□□□□ -0.27
VPS13A-204ENST00000376634 DDX5P17844 614 aaKnown RBP13.34□□□□□ -0.27
VPS13A-204ENST00000376634 MXI1P50539 228 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 FAF2Q96CS3 445 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 KIAA0232Q92628 1395 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 ANP32DO95626 131 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 SLFN14P0C7P3 912 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 PPP4R3CPQ6ZMV5 832 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 USP28Q96RU2 1077 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 ZSCAN32Q9NX65 697 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 ZSCAN9O15535 394 aaPredicted RBP13.34□□□□□ -0.27
VPS13A-204ENST00000376634 CCDC85BQ15834 202 aaPredicted RBP13.34□□□□□ -0.27
VPS13A-204ENST00000376634 ZBTB33Q86T24 672 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 A0A0G2JND7 137 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 HDLBPQ00341 1268 aaKnown RBP13.34□□□□□ -0.27
VPS13A-204ENST00000376634 IFT43Q96FT9 208 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 NHEJ1Q9H9Q4 299 aaPredicted RBP13.34□□□□□ -0.27
VPS13A-204ENST00000376634 TRPC5Q9UL62 973 aaPredicted RBP13.34□□□□□ -0.27
VPS13A-204ENST00000376634 ZNF263O14978 683 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 ZNF658Q5TYW1 1059 aaPredicted RBP13.34□□□□□ -0.27
VPS13A-204ENST00000376634 ARHGEF25Q86VW2 580 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 ZFYVE19Q96K21 471 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 HADHAP40939 763 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 INPP5FQ9Y2H2 1132 aa13.34□□□□□ -0.27
VPS13A-204ENST00000376634 RBL2Q08999 1139 aa13.33□□□□□ -0.27
VPS13A-204ENST00000376634 C1orf146Q5VVC0 180 aa13.33□□□□□ -0.27
VPS13A-204ENST00000376634 ACRBPQ8NEB7 543 aa13.33□□□□□ -0.27
VPS13A-204ENST00000376634 GPBP1L1Q9HC44 474 aaPredicted RBP13.33□□□□□ -0.27
VPS13A-204ENST00000376634 KDM4CQ9H3R0 1056 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 POLR3EQ9NVU0 708 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 GTSE1Q9NYZ3 720 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 PNMA3Q9UL41 463 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 SNX5Q9Y5X3 404 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 FGAP02671 866 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 SCRN1Q12765 414 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 BBS9Q3SYG4 887 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 ANKRD13CQ8N6S4 541 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 CNKSR1Q969H4 720 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 NLRP4Q96MN2 994 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 NOP53Q9NZM5 478 aaKnown RBP13.33□□□□□ -0.28
VPS13A-204ENST00000376634 CASZ1Q86V15 1759 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 KDM1AO60341 852 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 CDC37Q16543 378 aaPredicted RBP13.33□□□□□ -0.28
VPS13A-204ENST00000376634 TEKT4Q8WW24 435 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 MSTO1Q9BUK6 570 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 PPARGC1AQ9UBK2 798 aaKnown RBP13.33□□□□□ -0.28
VPS13A-204ENST00000376634 G3BP2Q9UN86 482 aaKnown RBP13.33□□□□□ -0.28
VPS13A-204ENST00000376634 CHD4Q14839 1912 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 A0A1W2PQ27 194 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 A0A1W2PQ64 194 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 A0A1W2PQD8 194 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 SUPT20HL1Q3ZLR7 823 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 TEDDM1Q5T9Z0 273 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 KIAA2013Q8IYS2 634 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 FMNL1O95466 1100 aaPredicted RBP13.33□□□□□ -0.28
VPS13A-204ENST00000376634 ARL4CP56559 192 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 EPM2AIP1Q7L775 607 aaPredicted RBP13.33□□□□□ -0.28
VPS13A-204ENST00000376634 RASSF3Q86WH2 238 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 SMYD4Q8IYR2 804 aaPredicted RBP13.33□□□□□ -0.28
VPS13A-204ENST00000376634 ICA1LQ8NDH6 482 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 SEL1LQ9UBV2 794 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 POLIQ9UNA4 740 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 ARIH2O95376 493 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 BRD1O95696 1058 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 THEM5Q8N1Q8 247 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 PDCD6IPQ8WUM4 868 aaKnown RBP13.33□□□□□ -0.28
VPS13A-204ENST00000376634 CYP26B1Q9NR63 512 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 ZNF500O60304 480 aaPredicted RBP13.33□□□□□ -0.28
VPS13A-204ENST00000376634 COBLO75128 1261 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 LLGL1Q15334 1064 aa13.33□□□□□ -0.28
VPS13A-204ENST00000376634 CALR3Q96L12 384 aaKnown RBP13.33□□□□□ -0.28
VPS13A-204ENST00000376634 CCDC195A0A1B0GUA6 201 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 BTBD18B2RXH4 712 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 PCDHA13Q9Y5I0 950 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 COPS2P61201 443 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 DOK7Q18PE1 504 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 STK25O00506 426 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 COPEO14579 308 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 PMS1P54277 932 aaKnown RBP13.32□□□□□ -0.28
VPS13A-204ENST00000376634 AP2B1P63010 937 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 LRRC63Q05C16 580 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 SLFN12LQ6IEE8 588 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 LRRC8BQ6P9F7 803 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 CCDC17Q96LX7 622 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 RNF26Q9BY78 433 aaPredicted RBP13.32□□□□□ -0.28
VPS13A-204ENST00000376634 DBNLQ9UJU6 430 aaKnown RBP13.32□□□□□ -0.28
VPS13A-204ENST00000376634 KHDRBS2Q5VWX1 349 aaKnown RBP13.32□□□□□ -0.28
VPS13A-204ENST00000376634 KLHL8Q9P2G9 620 aaPredicted RBP13.32□□□□□ -0.28
VPS13A-204ENST00000376634 KRT38O76015 456 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 GSPT1P15170 499 aaKnown RBP13.32□□□□□ -0.28
VPS13A-204ENST00000376634 A0A087WUV0 522 aaPredicted RBP13.32□□□□□ -0.28
VPS13A-204ENST00000376634 DIAPH2O60879 1101 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 CALB1P05937 261 aa13.32□□□□□ -0.28
VPS13A-204ENST00000376634 OSTNP61366 133 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms