RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 ITGB1P05556 798 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 UBE3AQ05086 875 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 NFX1Q12986 1120 aaKnown RBP26.36■■□□□ 1.81
C9orf47-202ENST00000375850 ADAM15Q13444 863 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 CAMK1Q14012 370 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 ZNF746Q6NUN9 644 aaPredicted RBP26.36■■□□□ 1.81
C9orf47-202ENST00000375850 RASEFQ8IZ41 740 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 KIAA0319LQ8IZA0 1049 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 ZNF710Q8N1W2 664 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 BBXQ8WY36 941 aaPredicted RBP26.36■■□□□ 1.81
C9orf47-202ENST00000375850 TCEANC2Q96MN5 208 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 ZMYND12Q9H0C1 365 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 TMX1Q9H3N1 280 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 C6orf50Q9HD87 102 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 ERVK-5Q9HDB9 667 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 FAM217BQ9NTX9 383 aaPredicted RBP26.36■■□□□ 1.81
C9orf47-202ENST00000375850 CD207Q9UJ71 328 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 CEP131Q9UPN4 1083 aa26.36■■□□□ 1.81
C9orf47-202ENST00000375850 IGLV3-22A0A075B6J6 115 aa26.35■■□□□ 1.81
C9orf47-202ENST00000375850 FAM86B1E9PN63 330 aa26.35■■□□□ 1.81
C9orf47-202ENST00000375850 DDX39AO00148 427 aaKnown RBP26.35■■□□□ 1.81
C9orf47-202ENST00000375850 DHX15O43143 795 aaKnown RBP26.35■■□□□ 1.81
C9orf47-202ENST00000375850 FAM86B2P0C5J1 330 aa26.35■■□□□ 1.81
C9orf47-202ENST00000375850 GNA11P29992 359 aa26.35■■□□□ 1.81
C9orf47-202ENST00000375850 CDC27P30260 824 aa26.35■■□□□ 1.81
C9orf47-202ENST00000375850 METAP2P50579 478 aaKnown RBP eCLIP26.35■■□□□ 1.81
C9orf47-202ENST00000375850 ADCK5Q3MIX3 580 aa26.35■■□□□ 1.81
C9orf47-202ENST00000375850 SLC24A5Q71RS6 500 aa26.35■■□□□ 1.81
C9orf47-202ENST00000375850 CCDC60Q8IWA6 550 aaPredicted RBP26.35■■□□□ 1.81
C9orf47-202ENST00000375850 KLHL23Q8NBE8 558 aa26.35■■□□□ 1.81
C9orf47-202ENST00000375850 ZNF577Q9BSK1 485 aa26.35■■□□□ 1.81
C9orf47-202ENST00000375850 RGS18Q9NS28 235 aa26.35■■□□□ 1.81
C9orf47-202ENST00000375850 PCDHB12Q9Y5F1 795 aa26.35■■□□□ 1.81
C9orf47-202ENST00000375850 DENND3A2RUS2 1198 aa26.34■■□□□ 1.81
C9orf47-202ENST00000375850 PAN2Q504Q3 1202 aaKnown RBP26.34■■□□□ 1.81
C9orf47-202ENST00000375850 JAKMIP3Q5VZ66 844 aa26.34■■□□□ 1.81
C9orf47-202ENST00000375850 SWSAP1Q6NVH7 229 aa26.34■■□□□ 1.81
C9orf47-202ENST00000375850 REXO1Q8N1G1 1221 aaKnown RBP26.34■■□□□ 1.81
C9orf47-202ENST00000375850 EFHBQ8N7U6 833 aa26.34■■□□□ 1.81
C9orf47-202ENST00000375850 KCNH6Q9H252 994 aa26.34■■□□□ 1.81
C9orf47-202ENST00000375850 IGFLR1Q9H665 355 aa26.34■■□□□ 1.81
C9orf47-202ENST00000375850 GINS2Q9Y248 185 aa26.34■■□□□ 1.81
C9orf47-202ENST00000375850 MAFBQ9Y5Q3 323 aaPredicted RBP26.34■■□□□ 1.81
C9orf47-202ENST00000375850 TBX10O75333 385 aa26.33■■□□□ 1.81
C9orf47-202ENST00000375850 EYA4O95677 639 aa26.33■■□□□ 1.81
C9orf47-202ENST00000375850 NDUFV1P49821 464 aa26.33■■□□□ 1.81
C9orf47-202ENST00000375850 CRYBB1P53674 252 aaPredicted RBP26.33■■□□□ 1.81
C9orf47-202ENST00000375850 DLX2Q07687 328 aaPredicted RBP26.33■■□□□ 1.81
C9orf47-202ENST00000375850 TMEM266Q2M3C6 531 aa26.33■■□□□ 1.81
C9orf47-202ENST00000375850 CKAP2LQ8IYA6 745 aa26.33■■□□□ 1.81
C9orf47-202ENST00000375850 BICD2Q8TD16 824 aa26.33■■□□□ 1.81
C9orf47-202ENST00000375850 POF1BQ8WVV4 589 aa26.33■■□□□ 1.81
C9orf47-202ENST00000375850 NAP1L2Q9ULW6 460 aaPredicted RBP26.33■■□□□ 1.81
C9orf47-202ENST00000375850 NOC2LQ9Y3T9 749 aaKnown RBP26.33■■□□□ 1.81
C9orf47-202ENST00000375850 PSAPP07602 524 aa26.32■■□□□ 1.8
C9orf47-202ENST00000375850 PDE12Q6L8Q7 609 aaKnown RBP26.32■■□□□ 1.8
C9orf47-202ENST00000375850 MSLNLQ96KJ4 702 aa26.32■■□□□ 1.8
C9orf47-202ENST00000375850 FAM167AQ96KS9 214 aa26.32■■□□□ 1.8
C9orf47-202ENST00000375850 ADAM2Q99965 735 aa26.32■■□□□ 1.8
C9orf47-202ENST00000375850 ELAC1Q9H777 363 aaKnown RBP26.32■■□□□ 1.8
C9orf47-202ENST00000375850 ST3GAL5Q9UNP4 418 aa26.32■■□□□ 1.8
C9orf47-202ENST00000375850 PCDHA10Q9Y5I2 948 aa26.32■■□□□ 1.8
C9orf47-202ENST00000375850 NID2Q14112 1375 aa26.32■■□□□ 1.8
C9orf47-202ENST00000375850 MAGEB2O15479 319 aa26.31■■□□□ 1.8
C9orf47-202ENST00000375850 PRPF3O43395 683 aaKnown RBP26.31■■□□□ 1.8
C9orf47-202ENST00000375850 IRS1P35568 1242 aa26.31■■□□□ 1.8
C9orf47-202ENST00000375850 ADD1P35611 737 aaKnown RBP26.31■■□□□ 1.8
C9orf47-202ENST00000375850 FBXL16Q8N461 479 aa26.31■■□□□ 1.8
C9orf47-202ENST00000375850 MYO7AQ13402 2215 aa26.3■■□□□ 1.8
C9orf47-202ENST00000375850 ZBTB42B2RXF5 422 aa26.3■■□□□ 1.8
C9orf47-202ENST00000375850 C9IYK1 514 aa26.3■■□□□ 1.8
C9orf47-202ENST00000375850 C22orf31O95567 290 aa26.3■■□□□ 1.8
C9orf47-202ENST00000375850 DNAJB1P25685 340 aa26.3■■□□□ 1.8
C9orf47-202ENST00000375850 CIITAP33076 1130 aa26.3■■□□□ 1.8
C9orf47-202ENST00000375850 GTF2F1P35269 517 aaKnown RBP eCLIP26.3■■□□□ 1.8
C9orf47-202ENST00000375850 AKAP17AQ02040 695 aaKnown RBP26.3■■□□□ 1.8
C9orf47-202ENST00000375850 COASYQ13057 564 aa26.3■■□□□ 1.8
C9orf47-202ENST00000375850 CLUL1Q15846 466 aa26.3■■□□□ 1.8
C9orf47-202ENST00000375850 SPOUT1Q5T280 376 aaKnown RBP26.3■■□□□ 1.8
C9orf47-202ENST00000375850 CCDC148Q8NFR7 591 aa26.3■■□□□ 1.8
C9orf47-202ENST00000375850 KCNB2Q92953 911 aa26.3■■□□□ 1.8
C9orf47-202ENST00000375850 UIMC1Q96RL1 719 aa26.3■■□□□ 1.8
C9orf47-202ENST00000375850 CDCA3Q99618 268 aaPredicted RBP26.3■■□□□ 1.8
C9orf47-202ENST00000375850 TMEM161AQ9NX61 479 aa26.3■■□□□ 1.8
C9orf47-202ENST00000375850 HOXA2O43364 376 aa26.29■■□□□ 1.8
C9orf47-202ENST00000375850 TMOD1P28289 359 aa26.29■■□□□ 1.8
C9orf47-202ENST00000375850 HERC4Q5GLZ8 1057 aaPredicted RBP26.29■■□□□ 1.8
C9orf47-202ENST00000375850 SMRP1Q8NCR6 262 aa26.29■■□□□ 1.8
C9orf47-202ENST00000375850 TMEM40Q8WWA1 233 aa26.29■■□□□ 1.8
C9orf47-202ENST00000375850 ATP6V0A4Q9HBG4 840 aa26.29■■□□□ 1.8
C9orf47-202ENST00000375850 LINC01565O15544 149 aa26.28■■□□□ 1.8
C9orf47-202ENST00000375850 MGEA5O60502 916 aa26.28■■□□□ 1.8
C9orf47-202ENST00000375850 CSPG5O95196 566 aa26.28■■□□□ 1.8
C9orf47-202ENST00000375850 ATP4AP20648 1035 aa26.28■■□□□ 1.8
C9orf47-202ENST00000375850 FAM189BP81408 668 aa26.28■■□□□ 1.8
C9orf47-202ENST00000375850 BLOC1S2Q6QNY1 142 aa26.28■■□□□ 1.8
C9orf47-202ENST00000375850 Q6ZUG5 572 aa26.28■■□□□ 1.8
C9orf47-202ENST00000375850 METTL13Q8N6R0 699 aa26.28■■□□□ 1.8
C9orf47-202ENST00000375850 MAP7D2Q96T17 732 aa26.28■■□□□ 1.8
C9orf47-202ENST00000375850 CDHR5Q9HBB8 845 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms