RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ISCUQ9H1K1 167 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 SIX2Q9NPC8 291 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 FBXL5Q9UKA1 691 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 RABGAP1Q9Y3P9 1069 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 PCDHAC2Q9Y5I4 1007 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 ASTN1O14525 1302 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 SLC16A3O15427 465 aaKnown RBP15.89■□□□□ 0.13
MSH5-201ENST00000375703 H2AFZP0C0S5 128 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 H2AFVQ71UI9 128 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 CYP2W1Q8TAV3 490 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.89■□□□□ 0.13
MSH5-201ENST00000375703 GJD4Q96KN9 370 aaPredicted RBP15.89■□□□□ 0.13
MSH5-201ENST00000375703 KCNQ5Q9NR82 932 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 RGL1Q9NZL6 768 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 GCNT4Q9P109 453 aa15.89■□□□□ 0.13
MSH5-201ENST00000375703 A0A087WUV0 522 aaPredicted RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 EYA4O95677 639 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 ANXA13P27216 316 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 HOXA13P31271 388 aaPredicted RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 CIITAP33076 1130 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 GJB7Q6PEY0 223 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 PEX26Q7Z412 305 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 KIAA0825Q8IV33 1275 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 METTL13Q8N6R0 699 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 POLR3CQ9BUI4 534 aaPredicted RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 AP1M1Q9BXS5 423 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 AJAP1Q9UKB5 411 aaPredicted RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 FAM169AQ9Y6X4 670 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 ZEB2O60315 1214 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 HSPA9P38646 679 aaKnown RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 JAM2P57087 298 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 ERVK-9P63128 1117 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 SYDE2Q5VT97 1194 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 KDM7AQ6ZMT4 941 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 EIF1ADQ8N9N8 165 aaKnown RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.88■□□□□ 0.131e-7■■□□□ 13.4
MSH5-201ENST00000375703 TMX4Q9H1E5 349 aaPredicted RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 VAV3Q9UKW4 847 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 ATAD5Q96QE3 1844 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 PGRMC1O00264 195 aaKnown RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 EML1O00423 815 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 SART1O43290 800 aaKnown RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 TTC31Q49AM3 519 aaPredicted RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 RINT1Q6NUQ1 792 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 TATDN1Q6P1N9 297 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 TMEM179Q6ZVK1 233 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 MAATS1Q7Z4T9 603 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 PIGOQ8TEQ8 1089 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 U2AF1L4Q8WU68 220 aaKnown RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 CALR3Q96L12 384 aaKnown RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 RNPC3Q96LT9 517 aaKnown RBP15.88■□□□□ 0.13
MSH5-201ENST00000375703 FAM198AQ9UFP1 575 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 PLAAQ9Y263 795 aa15.88■□□□□ 0.13
MSH5-201ENST00000375703 DDX3XO00571 662 aaKnown RBP eCLIP15.87■□□□□ 0.137e-9■■□□□ 12.6
MSH5-201ENST00000375703 NDUFAB1O14561 156 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 TGFB1I1O43294 461 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 GDF11O95390 407 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 NDUFB10O96000 172 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 TAL1P17542 331 aaPredicted RBP15.87■□□□□ 0.13
MSH5-201ENST00000375703 MMP14P50281 582 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 CUL1Q13616 776 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 SH3BP5LQ7L8J4 393 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 PROCA1Q8NCQ7 364 aaPredicted RBP15.87■□□□□ 0.13
MSH5-201ENST00000375703 ATP6V1G3Q96LB4 118 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 DBNDD1Q9H9R9 158 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 NENFQ9UMX5 172 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 SAMM50Q9Y512 469 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 THSD7AQ9UPZ6 1657 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 GREB1LQ9C091 1923 aaPredicted RBP15.87■□□□□ 0.13
MSH5-201ENST00000375703 LTBP1Q14766 1721 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 A0A0A6YYK5 440 aaPredicted RBP15.87■□□□□ 0.13
MSH5-201ENST00000375703 GTPBP10A4D1E9 387 aaKnown RBP15.87■□□□□ 0.13
MSH5-201ENST00000375703 KRIT1O00522 736 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 GFPT2O94808 682 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 FERP16591 822 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 GAP43P17677 238 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 STAT1P42224 750 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 CTTNQ14247 550 aaKnown RBP15.87■□□□□ 0.13
MSH5-201ENST00000375703 ABCB5Q2M3G0 1257 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 CEP85LQ5SZL2 805 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 EMC10Q5UCC4 262 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 SLFN11Q7Z7L1 901 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 DAAM2Q86T65 1068 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 SYCE1Q8N0S2 351 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 MYCT1Q8N699 235 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 GMCL1P1Q8NEA9 526 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 GMCL1Q96IK5 515 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 OLFML3Q9NRN5 406 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 INTUQ9ULD6 942 aa15.87■□□□□ 0.13
MSH5-201ENST00000375703 FAM13AO94988 1023 aa15.86■□□□□ 0.13
MSH5-201ENST00000375703 BMP3P12645 472 aa15.86■□□□□ 0.13
MSH5-201ENST00000375703 NPR1P16066 1061 aa15.86■□□□□ 0.13
MSH5-201ENST00000375703 NR1D1P20393 614 aa15.86■□□□□ 0.13
MSH5-201ENST00000375703 ALDH1B1P30837 517 aa15.86■□□□□ 0.13
MSH5-201ENST00000375703 PSMC2P35998 433 aaKnown RBP15.86■□□□□ 0.13
MSH5-201ENST00000375703 PODNQ7Z5L7 613 aa15.86■□□□□ 0.13
MSH5-201ENST00000375703 PACS2Q86VP3 889 aa15.86■□□□□ 0.13
MSH5-201ENST00000375703 DDX42Q86XP3 938 aaKnown RBP eCLIP15.86■□□□□ 0.132e-6■□□□□ 8.3
MSH5-201ENST00000375703 TPH2Q8IWU9 490 aa15.86■□□□□ 0.13
MSH5-201ENST00000375703 FAM186BQ8IYM0 893 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms