RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ARHGAP4P98171 946 aa18.14■□□□□ 0.5
VARS-215ENST00000375663 AP3B2Q13367 1082 aa18.14■□□□□ 0.5
VARS-215ENST00000375663 CCDC14Q49A88 953 aa18.14■□□□□ 0.5
VARS-215ENST00000375663 SYDE2Q5VT97 1194 aa18.14■□□□□ 0.5
VARS-215ENST00000375663 SPATA24Q86W54 205 aa18.14■□□□□ 0.5
VARS-215ENST00000375663 CHMP6Q96FZ7 201 aa18.14■□□□□ 0.5
VARS-215ENST00000375663 DMGDHQ9UI17 866 aaKnown RBP18.14■□□□□ 0.5
VARS-215ENST00000375663 PAPD7Q5XG87 772 aaKnown RBP18.14■□□□□ 0.49
VARS-215ENST00000375663 CASC4Q6P4E1 433 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 PHLDB2Q86SQ0 1253 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 GBP7Q8N8V2 638 aaPredicted RBP18.14■□□□□ 0.49
VARS-215ENST00000375663 KLC4Q9NSK0 619 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 ANAPC4Q9UJX5 808 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 TCHHQ07283 1943 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 SEC24CP53992 1094 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 NT5DC1Q5TFE4 455 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.14■□□□□ 0.49
VARS-215ENST00000375663 CD209Q9NNX6 404 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 CCPG1Q9ULG6 757 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 STAT3P40763 770 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 JDP2Q8WYK2 163 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 AZI2Q9H6S1 392 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 CAPN6Q9Y6Q1 641 aa18.14■□□□□ 0.49
VARS-215ENST00000375663 COL15A1P39059 1388 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 EXOC1LA0A1B0GW35 172 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 TCP10L2B9ZVM9 353 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 KLRC1P26715 233 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.13■□□□□ 0.493e-6■■□□□ 14.3
VARS-215ENST00000375663 C1orf167Q5SNV9 1468 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 PXDNQ92626 1479 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 H0YIN7 160 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 TXNDC9O14530 226 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 SERPINB2P05120 415 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 TMOD1P28289 359 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 HADHQ16836 314 aaKnown RBP18.13■□□□□ 0.49
VARS-215ENST00000375663 TRIM11Q96F44 468 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 FAM217BQ9NTX9 383 aaPredicted RBP18.13■□□□□ 0.49
VARS-215ENST00000375663 STXBP3O00186 592 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 HDLBPQ00341 1268 aaKnown RBP18.13■□□□□ 0.49
VARS-215ENST00000375663 CSRNP1Q96S65 589 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 DHX36Q9H2U1 1008 aaKnown RBP18.13■□□□□ 0.49
VARS-215ENST00000375663 PI4KBQ9UBF8 816 aa18.13■□□□□ 0.49
VARS-215ENST00000375663 TBC1D9BQ66K14 1250 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 TTI2Q6NXR4 508 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 SCYL3Q8IZE3 742 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 OR2W6PQ8NHA6 318 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 CFAP61Q8NHU2 1237 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 RFFLQ8WZ73 363 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 MLXIPLQ9NP71 852 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 TXLNGQ9NUQ3 528 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 RAD51CO43502 376 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 GPC5P78333 572 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 PPP1R18Q6NYC8 613 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 GOLGA8IPA6NC78 632 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 GOLGA8JA6NMD2 632 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 SGK1O00141 431 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 EVI5O60447 810 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 CA4P22748 312 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 ARHGEF16Q5VV41 709 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 PDXDC2PQ6P474 469 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 PAXIP1Q6ZW49 1069 aaPredicted RBP18.12■□□□□ 0.49
VARS-215ENST00000375663 LARGE2Q8N3Y3 721 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 PROCA1Q8NCQ7 364 aaPredicted RBP18.12■□□□□ 0.49
VARS-215ENST00000375663 VCX3BQ9H321 246 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 TTI1O43156 1089 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 BMP6P22004 513 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 HERVK_113P62684 666 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 SEC23AQ15436 765 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 MAP7D1Q3KQU3 841 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 ADGRF4Q8IZF3 695 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 RNPC3Q96LT9 517 aaKnown RBP18.12■□□□□ 0.49
VARS-215ENST00000375663 FAM20AQ96MK3 541 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 CFAP57Q96MR6 1250 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 GBP5Q96PP8 586 aa18.12■□□□□ 0.49
VARS-215ENST00000375663 NOP53Q9NZM5 478 aaKnown RBP18.12■□□□□ 0.49
VARS-215ENST00000375663 BAG2O95816 211 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 ACTN1P12814 892 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 PIK3CAP42336 1068 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 GCLMP48507 274 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 PITPNM3Q9BZ71 974 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 INTS13Q9NVM9 706 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.11■□□□□ 0.49
VARS-215ENST00000375663 PCDHB4Q9Y5E5 795 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 LRRD1A4D1F6 860 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 FAM187AA6NFU0 413 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 ARHGAP42A6NI28 874 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 TAF11Q15544 211 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 ZNF746Q6NUN9 644 aaPredicted RBP18.11■□□□□ 0.49
VARS-215ENST00000375663 FRMD5Q7Z6J6 570 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 DDX42Q86XP3 938 aaKnown RBP eCLIP18.11■□□□□ 0.49
VARS-215ENST00000375663 PPIP5K2O43314 1243 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 UCHL3P15374 230 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 QRICH1Q2TAL8 776 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 FAM47EQ6ZV65 393 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 MCF2L2Q86YR7 1114 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 COMMD10Q9Y6G5 202 aa18.11■□□□□ 0.49
VARS-215ENST00000375663 LRRIQ4A6NIV6 560 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 FTLP02792 175 aaPredicted RBP18.1■□□□□ 0.49
VARS-215ENST00000375663 STAT2P52630 851 aa18.1■□□□□ 0.49
VARS-215ENST00000375663 EARS2Q5JPH6 523 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms