RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 RSPH10BP0C881 870 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 FRA10AC1Q70Z53 315 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 ERICH1Q86X53 443 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 CCDC17Q96LX7 622 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 SMYD3Q9H7B4 428 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 RGS12O14924 1447 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 MAP3K7O43318 606 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 ATP1A3P13637 1013 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 RHPN2Q8IUC4 686 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 H3BRJ5 948 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 MOCS2O96007 188 aaPredicted RBP15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 ARL4DP49703 201 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 CAPRIN1Q14444 709 aaKnown RBP15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 MCTP2Q6DN12 878 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 TRIM59Q8IWR1 403 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 ATXN7L3BQ96GX2 97 aa15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 RNF26Q9BY78 433 aaPredicted RBP15.81■□□□□ 0.12
NOTCH4-201ENST00000375023 PGRMC1O00264 195 aaKnown RBP15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 CHRNA5P30532 468 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 AGR3Q8TD06 166 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 NCLNQ969V3 563 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 WDR11Q9BZH6 1224 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 WDR64B1ANS9 1081 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 TWF2Q6IBS0 349 aaKnown RBP15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 RFX8Q6ZV50 586 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 FAM213AQ9BRX8 229 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 PCSK1NQ9UHG2 260 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 CDC23Q9UJX2 597 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 SLC16A4O15374 487 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 ZNF507Q8TCN5 953 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 PIGBQ92521 554 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 PNMA3Q9UL41 463 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 FBXL13Q8NEE6 735 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 PYROXD1Q8WU10 500 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 DHTKD1Q96HY7 919 aaPredicted RBP15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 ADAMTS1Q9UHI8 967 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 HNRNPCL2B2RXH8 293 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 HNRNPCL1O60812 293 aaKnown RBP15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 DR1Q01658 176 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 CC2D1AQ6P1N0 951 aaPredicted RBP15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 MFSD1Q9H3U5 465 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 TMEM206Q9H813 350 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 EPS15L1Q9UBC2 864 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 NFU1Q9UMS0 254 aa15.8■□□□□ 0.12
NOTCH4-201ENST00000375023 DDHD2O94830 711 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 GCLMP48507 274 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 ERFP50548 548 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 NNTQ13423 1086 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 CTSHP09668 335 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 ZNF746Q6NUN9 644 aaPredicted RBP15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 IGFLR1Q9H665 355 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 KIAA0556O60303 1618 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 NEDD4P46934 1319 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 A0A0G2JND7 137 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 C2CD2LO14523 706 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 LMNB2Q03252 620 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 ADAM33Q9BZ11 813 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 SAYSD1Q9NPB0 183 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 HPS4Q9NQG7 708 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 PCDHA6Q9UN73 950 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 PCDHA8Q9Y5H6 950 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 PTPRTO14522 1441 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 IRF1P10914 325 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 SP100P23497 879 aaPredicted RBP15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 ZNF211Q13398 564 aaPredicted RBP15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 GSDMAQ96QA5 445 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 PNMA2Q9UL42 364 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 ADORA2BP29275 332 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 FKBP3Q00688 224 aaKnown RBP15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 MTMR1Q13613 665 aa15.79■□□□□ 0.12
NOTCH4-201ENST00000375023 WDR62O43379 1518 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 TMEM94Q12767 1356 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 MXD4Q14582 209 aaPredicted RBP15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 URGCPQ8TCY9 931 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 TRIM4Q9C037 500 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 RRAGCQ9HB90 399 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 WDR17Q8IZU2 1322 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 VCPP55072 806 aaKnown RBP15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 GFPT1Q06210 699 aaPredicted RBP15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 EDEM3Q9BZQ6 932 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 CRKP46108 304 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 SH2D3AQ9BRG2 576 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 GTSE1Q9NYZ3 720 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 ANAPC7Q9UJX3 599 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 FBXL5Q9UKA1 691 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 SLC13A4Q9UKG4 626 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 SERPING1P05155 500 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 PRDX5P30044 214 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 MCAMP43121 646 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 FBXW10Q5XX13 1052 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 MRPL47Q9HD33 250 aaKnown RBP15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 KLHL8Q9P2G9 620 aaPredicted RBP15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 ATP10AO60312 1499 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 CIAO1O76071 339 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 FGGP02679 453 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 CYP2B6P20813 491 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 POU5F1BQ06416 359 aa15.78■□□□□ 0.12
NOTCH4-201ENST00000375023 TTC1Q99614 292 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms