RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 CALUO43852 315 aaPredicted RBP20.06■□□□□ 0.8
RXRB-202ENST00000374685 TLR2O60603 784 aa20.06■□□□□ 0.8
RXRB-202ENST00000374685 MRPS25P82663 173 aaKnown RBP20.06■□□□□ 0.8
RXRB-202ENST00000374685 PPP2R5CQ13362 524 aa20.06■□□□□ 0.8
RXRB-202ENST00000374685 C1orf186Q6ZWK4 172 aa20.06■□□□□ 0.8
RXRB-202ENST00000374685 GPR161Q8N6U8 529 aaKnown RBP20.06■□□□□ 0.8
RXRB-202ENST00000374685 RIPK3Q9Y572 518 aa20.06■□□□□ 0.8
RXRB-202ENST00000374685 WDR46O15213 610 aaKnown RBP20.06■□□□□ 0.8
RXRB-202ENST00000374685 USO1O60763 962 aaKnown RBP20.06■□□□□ 0.8
RXRB-202ENST00000374685 GNA14O95837 355 aa20.06■□□□□ 0.8
RXRB-202ENST00000374685 SYCP3Q8IZU3 236 aa20.06■□□□□ 0.8
RXRB-202ENST00000374685 SPAG5Q96R06 1193 aa20.06■□□□□ 0.8
RXRB-202ENST00000374685 ADAMTS1Q9UHI8 967 aa20.06■□□□□ 0.8
RXRB-202ENST00000374685 SAR1BQ9Y6B6 198 aa20.06■□□□□ 0.8
RXRB-202ENST00000374685 ZHX2Q9Y6X8 837 aa20.06■□□□□ 0.8
RXRB-202ENST00000374685 TISP43B9A030 160 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 ITGB3BPQ13352 177 aaPredicted RBP20.05■□□□□ 0.8
RXRB-202ENST00000374685 MTMR1Q13613 665 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 SYTL5Q8TDW5 730 aaPredicted RBP20.05■□□□□ 0.8
RXRB-202ENST00000374685 RABGGTAQ92696 567 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 NACC1Q96RE7 527 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 PNKPQ96T60 521 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 TUFT1Q9NNX1 390 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 MYO1AQ9UBC5 1043 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 MYO1CO00159 1063 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 PEX10O60683 326 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 ZRANB2O95218 330 aaKnown RBP eCLIP20.05■□□□□ 0.8
RXRB-202ENST00000374685 MRPS9P82933 396 aaKnown RBP20.05■□□□□ 0.8
RXRB-202ENST00000374685 NLGN2Q8NFZ4 835 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 MMS19Q96T76 1030 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 RMDN3Q96TC7 470 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 SMARCAL1Q9NZC9 954 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 ZNF541Q9H0D2 1346 aa20.05■□□□□ 0.8
RXRB-202ENST00000374685 NCK2O43639 380 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 HIP1RO75146 1068 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 EPB41P11171 864 aaKnown RBP20.04■□□□□ 0.8
RXRB-202ENST00000374685 MATR3P43243 847 aaKnown RBP eCLIP20.04■□□□□ 0.8
RXRB-202ENST00000374685 EDRF1Q3B7T1 1238 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 SLC9C1Q4G0N8 1177 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 PCIF1Q9H4Z3 704 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 TYW1Q9NV66 732 aaKnown RBP20.04■□□□□ 0.8
RXRB-202ENST00000374685 CEP72Q9P209 647 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 SALL4Q9UJQ4 1053 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 MYH10P35580 1976 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 TGFB1I1O43294 461 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 ZMYND10O75800 440 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 KLHL30Q0D2K2 578 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 TKFCQ3LXA3 575 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 EPM2AIP1Q7L775 607 aaPredicted RBP20.04■□□□□ 0.8
RXRB-202ENST00000374685 UBXN6Q9BZV1 441 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 SUGCTQ9HAC7 445 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 SLC38A10Q9HBR0 1119 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 RGPD3A6NKT7 1758 aaPredicted RBP20.04■□□□□ 0.8
RXRB-202ENST00000374685 RGPD4Q7Z3J3 1758 aa20.04■□□□□ 0.8
RXRB-202ENST00000374685 PSME4Q14997 1843 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 ATP9AO75110 1047 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 AFPP02771 609 aaKnown RBP20.03■□□□□ 0.8
RXRB-202ENST00000374685 TRIM49P0CI25 452 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 TRIM49CP0CI26 452 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 SETQ01105 290 aaPredicted RBP20.03■□□□□ 0.8
RXRB-202ENST00000374685 AMPD2Q01433 879 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 EXOC3L4Q17RC7 722 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 ICE2Q659A1 982 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 TRPM4Q8TD43 1214 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 MTFR1LQ9H019 292 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 KIAA1683Q9H0B3 1180 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 PICK1Q9NRD5 415 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 PDXKO00764 312 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 CTNND1O60716 968 aaKnown RBP20.03■□□□□ 0.8
RXRB-202ENST00000374685 HSD17B4P51659 736 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 GTF2A1P52655 376 aaPredicted RBP20.03■□□□□ 0.8
RXRB-202ENST00000374685 EPHA7Q15375 998 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 HGSNATQ68CP4 663 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 PADI6Q6TGC4 694 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 PPP4R3CPQ6ZMV5 832 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 RNF207Q6ZRF8 634 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 ANKZF1Q9H8Y5 726 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 GPRC5CQ9NQ84 441 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 TRAF3IP3Q9Y228 551 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 BAATQ14032 418 aaPredicted RBP20.03■□□□□ 0.8
RXRB-202ENST00000374685 ARHGEF16Q5VV41 709 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 LPAR1Q92633 364 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 PACSIN1Q9BY11 444 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 VPS33BQ9H267 617 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 EHD2Q9NZN4 543 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 GCNT4Q9P109 453 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 PPP1R9AQ9ULJ8 1098 aa20.03■□□□□ 0.8
RXRB-202ENST00000374685 K7ENM7 598 aa20.02■□□□□ 0.8
RXRB-202ENST00000374685 ZBED4O75132 1171 aa20.02■□□□□ 0.8
RXRB-202ENST00000374685 RPL13P26373 211 aaKnown RBP20.02■□□□□ 0.8
RXRB-202ENST00000374685 PSEN1P49768 467 aa20.02■□□□□ 0.8
RXRB-202ENST00000374685 ZNF280AP59817 542 aaPredicted RBP20.02■□□□□ 0.8
RXRB-202ENST00000374685 PLA2G4FQ68DD2 849 aa20.02■□□□□ 0.8
RXRB-202ENST00000374685 CC2D1AQ6P1N0 951 aaPredicted RBP20.02■□□□□ 0.8
RXRB-202ENST00000374685 FAM186BQ8IYM0 893 aa20.02■□□□□ 0.8
RXRB-202ENST00000374685 STK24Q9Y6E0 443 aa20.02■□□□□ 0.8
RXRB-202ENST00000374685 WHAMMP3Q1A5X7 153 aa20.02■□□□□ 0.79
RXRB-202ENST00000374685 TRAPPC11Q7Z392 1133 aa20.02■□□□□ 0.79
RXRB-202ENST00000374685 MCF2L2Q86YR7 1114 aa20.02■□□□□ 0.79
RXRB-202ENST00000374685 EHBP1Q8NDI1 1231 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms