RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 KCNA1Q09470 495 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 SYCP1Q15431 976 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 DNTTIP2Q5QJE6 756 aaKnown RBP17.32■□□□□ 0.36
HDAC8-209ENST00000373589 ODR4Q5SWX8 454 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 FKBP15Q5T1M5 1219 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 NYAP1Q6ZVC0 841 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 ANO5Q75V66 913 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 FAM178BQ8IXR5 827 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 RETREG2Q8NC44 543 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 GTF3C2Q8WUA4 911 aaPredicted RBP17.32■□□□□ 0.36
HDAC8-209ENST00000373589 FGD4Q96M96 766 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 MROH8Q9H579 483 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 GBA2Q9HCG7 927 aaPredicted RBP17.32■□□□□ 0.36
HDAC8-209ENST00000373589 ABHD10Q9NUJ1 306 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 TRMT1Q9NXH9 659 aaKnown RBP17.32■□□□□ 0.36
HDAC8-209ENST00000373589 PNMA3Q9UL41 463 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 CAPN11Q9UMQ6 739 aa17.32■□□□□ 0.36
HDAC8-209ENST00000373589 ZMYM2Q9UBW7 1377 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 TTC26A0AVF1 554 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 TMEM150BA6NC51 233 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 BACH1O14867 736 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 TGFB1I1O43294 461 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 ZNF862O60290 1169 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 DKC1O60832 514 aaKnown RBP eCLIP17.31■□□□□ 0.36
HDAC8-209ENST00000373589 PPP1R37O75864 691 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 MAPTP10636 758 aaKnown RBP17.31■□□□□ 0.36
HDAC8-209ENST00000373589 CETPP11597 493 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 NR2F2P24468 414 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 ERVK-9P63128 1117 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 ERVK-24P63145 666 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 FIGNQ5HY92 759 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 UTP14CQ5TAP6 766 aaKnown RBP17.31■□□□□ 0.36
HDAC8-209ENST00000373589 TRIM59Q8IWR1 403 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 SHCBP1Q8NEM2 672 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 ATP6V0A1Q93050 837 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 PPP1R13BQ96KQ4 1090 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 NUP58Q9BVL2 599 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 GABBR1Q9UBS5 961 aa17.31■□□□□ 0.36
HDAC8-209ENST00000373589 ATG7O95352 703 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 CYP2C8P10632 490 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 GTF2A2P52657 109 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 NFIL3Q16649 462 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 CCDC40Q4G0X9 1142 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 ZC2HC1CQ53FD0 456 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-209ENST00000373589 STXBP4Q6ZWJ1 553 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 C16orf45Q96MC5 204 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-209ENST00000373589 SIK3Q9Y2K2 1263 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 SOCS7O14512 581 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 USO1O60763 962 aaKnown RBP17.3■□□□□ 0.36
HDAC8-209ENST00000373589 KRT9P35527 623 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 KLK7P49862 253 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 NPEPPSP55786 919 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 XKR9Q5GH70 373 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 PLA2G4FQ68DD2 849 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 SWSAP1Q6NVH7 229 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 SEPT14Q6ZU15 432 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 CCDC60Q8IWA6 550 aaPredicted RBP17.3■□□□□ 0.36
HDAC8-209ENST00000373589 CCDC43Q96MW1 224 aaKnown RBP17.3■□□□□ 0.36
HDAC8-209ENST00000373589 MMP19Q99542 508 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 DNAJC7Q99615 494 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 SH2D3AQ9BRG2 576 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 LARSQ9P2J5 1176 aaKnown RBP17.3■□□□□ 0.36
HDAC8-209ENST00000373589 PCDHB13Q9Y5F0 798 aa17.3■□□□□ 0.36
HDAC8-209ENST00000373589 IGSF9BQ9UPX0 1349 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 BTBD19C9JJ37 291 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 PDHXO00330 501 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 CCP110O43303 1012 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 NR3C1P04150 777 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 PGK2P07205 417 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 SUPT20HL2P0C7V6 817 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 TGFB3P10600 412 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 PLS3P13797 630 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 UBA1P22314 1058 aaKnown RBP17.29■□□□□ 0.36
HDAC8-209ENST00000373589 RPL13P26373 211 aaKnown RBP17.29■□□□□ 0.36
HDAC8-209ENST00000373589 KCTD2Q14681 263 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 MIS18BP1Q6P0N0 1132 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 CYFIP1Q7L576 1253 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 OTUD6AQ7L8S5 288 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 C2orf69Q8N8R5 385 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 BRI3BPQ8WY22 251 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 IQCDQ96DY2 449 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 LUC7L2Q9Y383 392 aaKnown RBP17.29■□□□□ 0.36
HDAC8-209ENST00000373589 LRRC37A2A6NM11 1700 aa17.29■□□□□ 0.36
HDAC8-209ENST00000373589 SYNGAP1Q96PV0 1343 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 CCL15-CCL14A0A0B4J2E2 113 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 A0A1W2PQJ5 194 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 SOWAHDA6NJG2 315 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 CELF2O95319 508 aaKnown RBP17.28■□□□□ 0.36
HDAC8-209ENST00000373589 TNNT1P13805 278 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 TRIM21P19474 475 aaKnown RBP17.28■□□□□ 0.36
HDAC8-209ENST00000373589 SP4Q02446 784 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 CCL15Q16663 113 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 MAEAQ7L5Y9 396 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 FRMD5Q7Z6J6 570 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 ANKRD23Q86SG2 305 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 OR8K1Q8NGG5 319 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 DRC1Q96MC2 740 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 ST6GALNAC4Q9H4F1 302 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 FAM184BQ9ULE4 1060 aa17.28■□□□□ 0.36
HDAC8-209ENST00000373589 R3HCC1Q9Y3T6 440 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms