RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 YBX3P16989 372 aaKnown RBP eCLIP21.55■■□□□ 1.042e-6■■□□□ 11.9
HDAC1-201ENST00000373548 RPL13P26373 211 aaKnown RBP21.55■■□□□ 1.04
HDAC1-201ENST00000373548 RARRES1P49788 294 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 KCNH2Q12809 1159 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 ZNF569Q5MCW4 686 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 RRAGAQ7L523 313 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 INPP4AQ96PE3 977 aaPredicted RBP21.55■■□□□ 1.04
HDAC1-201ENST00000373548 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.55■■□□□ 1.04
HDAC1-201ENST00000373548 V9GYY5 206 aaPredicted RBP21.55■■□□□ 1.04
HDAC1-201ENST00000373548 PLEKP08567 350 aaPredicted RBP21.55■■□□□ 1.04
HDAC1-201ENST00000373548 CASP4P49662 377 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 JAK3P52333 1124 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 KRT76Q01546 638 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 TREML2Q5T2D2 321 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 PDXDC1Q6P996 788 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 KSR1Q8IVT5 923 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 CRACR2AQ9BSW2 395 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 SYT17Q9BSW7 474 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 LSM14BQ9BX40 385 aaKnown RBP21.55■■□□□ 1.04
HDAC1-201ENST00000373548 ARHGAP20Q9P2F6 1191 aa21.55■■□□□ 1.04
HDAC1-201ENST00000373548 DOCK5Q9H7D0 1870 aa21.54■■□□□ 1.04
HDAC1-201ENST00000373548 WDR64B1ANS9 1081 aa21.54■■□□□ 1.04
HDAC1-201ENST00000373548 EIF3CLB5ME19 914 aaKnown RBP21.54■■□□□ 1.04
HDAC1-201ENST00000373548 SLC16A3O15427 465 aaKnown RBP21.54■■□□□ 1.04
HDAC1-201ENST00000373548 SFNP31947 248 aa21.54■■□□□ 1.04
HDAC1-201ENST00000373548 KRT83P78385 493 aa21.54■■□□□ 1.04
HDAC1-201ENST00000373548 EIF3CQ99613 913 aaKnown RBP21.54■■□□□ 1.04
HDAC1-201ENST00000373548 CEP72Q9P209 647 aa21.54■■□□□ 1.04
HDAC1-201ENST00000373548 CSADQ9Y600 493 aa21.54■■□□□ 1.04
HDAC1-201ENST00000373548 A0A0G2JMZ2 1700 aa21.54■■□□□ 1.04
HDAC1-201ENST00000373548 PPP1R12BO60237 982 aaPredicted RBP21.53■■□□□ 1.04
HDAC1-201ENST00000373548 RGS20O76081 388 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 YWHABP31946 246 aaKnown RBP21.53■■□□□ 1.04
HDAC1-201ENST00000373548 NFIL3Q16649 462 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 STXBP4Q6ZWJ1 553 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 CACNA2D4Q7Z3S7 1137 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 NLRX1Q86UT6 975 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 C4orf19Q8IY42 314 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 SLC35F6Q8N357 371 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 STRA6Q9BX79 667 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 TRIM10Q9UDY6 481 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 MRFAP1Q9Y605 127 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 PPP1R37O75864 691 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 PSMC5P62195 406 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 PPP2R3AQ06190 1150 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 C9orf131Q5VYM1 1079 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 MAEAQ7L5Y9 396 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 HAUS4Q9H6D7 363 aa21.53■■□□□ 1.04
HDAC1-201ENST00000373548 METTL14Q9HCE5 456 aaKnown RBP21.53■■□□□ 1.04
HDAC1-201ENST00000373548 TMEM150BA6NC51 233 aa21.52■■□□□ 1.04
HDAC1-201ENST00000373548 MAFGO15525 162 aa21.52■■□□□ 1.04
HDAC1-201ENST00000373548 EPB41P11171 864 aaKnown RBP21.52■■□□□ 1.04
HDAC1-201ENST00000373548 APBA1Q02410 837 aa21.52■■□□□ 1.04
HDAC1-201ENST00000373548 ZNF662Q6ZS27 426 aa21.52■■□□□ 1.04
HDAC1-201ENST00000373548 NLRC4Q9NPP4 1024 aa21.52■■□□□ 1.04
HDAC1-201ENST00000373548 MYO1AQ9UBC5 1043 aa21.52■■□□□ 1.04
HDAC1-201ENST00000373548 TCEAL9Q9UHQ7 104 aa21.52■■□□□ 1.04
HDAC1-201ENST00000373548 TFR2Q9UP52 801 aa21.52■■□□□ 1.04
HDAC1-201ENST00000373548 AFPP02771 609 aaKnown RBP21.52■■□□□ 1.03
HDAC1-201ENST00000373548 XRCC5P13010 732 aaKnown RBP21.52■■□□□ 1.03
HDAC1-201ENST00000373548 KCNA2P16389 499 aa21.52■■□□□ 1.03
HDAC1-201ENST00000373548 ZNF746Q6NUN9 644 aaPredicted RBP21.52■■□□□ 1.03
HDAC1-201ENST00000373548 BORCS6Q96GS4 357 aa21.52■■□□□ 1.03
HDAC1-201ENST00000373548 CCDC42Q96M95 316 aa21.52■■□□□ 1.03
HDAC1-201ENST00000373548 SENP7Q9BQF6 1050 aa21.52■■□□□ 1.03
HDAC1-201ENST00000373548 SH2D3AQ9BRG2 576 aa21.52■■□□□ 1.03
HDAC1-201ENST00000373548 CARD6Q9BX69 1037 aa21.52■■□□□ 1.03
HDAC1-201ENST00000373548 MAF1Q9H063 256 aa21.52■■□□□ 1.03
HDAC1-201ENST00000373548 PCDHB13Q9Y5F0 798 aa21.52■■□□□ 1.03
HDAC1-201ENST00000373548 ZNF263O14978 683 aa21.51■■□□□ 1.03
HDAC1-201ENST00000373548 USO1O60763 962 aaKnown RBP21.51■■□□□ 1.03
HDAC1-201ENST00000373548 RDM1Q8NG50 284 aa21.51■■□□□ 1.03
HDAC1-201ENST00000373548 MOV10L1Q9BXT6 1211 aaKnown RBP21.51■■□□□ 1.03
HDAC1-201ENST00000373548 GUCA1BQ9UMX6 200 aa21.51■■□□□ 1.03
HDAC1-201ENST00000373548 RCCD1A6NED2 376 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 BACH1O14867 736 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 PEX10O60683 326 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 EIF4A3P38919 411 aaKnown RBP21.5■■□□□ 1.03
HDAC1-201ENST00000373548 POLR2FP61218 127 aaKnown RBP21.5■■□□□ 1.03
HDAC1-201ENST00000373548 CYP27A1Q02318 531 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 ELF2Q15723 593 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 UTP14CQ5TAP6 766 aaKnown RBP21.5■■□□□ 1.03
HDAC1-201ENST00000373548 LBX2Q6XYB7 198 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 KIAA1328Q86T90 577 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 GPIHBP1Q8IV16 184 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 GBP3Q9H0R5 595 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 GANQ9H2C0 597 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 AGPAT3Q9NRZ7 376 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 LARSQ9P2J5 1176 aaKnown RBP21.5■■□□□ 1.03
HDAC1-201ENST00000373548 IPO7O95373 1038 aaKnown RBP21.5■■□□□ 1.03
HDAC1-201ENST00000373548 IREB2P48200 963 aaKnown RBP21.5■■□□□ 1.03
HDAC1-201ENST00000373548 DCAF17Q5H9S7 520 aaPredicted RBP21.5■■□□□ 1.03
HDAC1-201ENST00000373548 DPY19L2P1Q6NXN4 242 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 HS2ST1Q7LGA3 356 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 MTERF4Q7Z6M4 381 aaKnown RBP21.5■■□□□ 1.03
HDAC1-201ENST00000373548 CHST13Q8NET6 341 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 SLC35C1Q96A29 364 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 ELP3Q9H9T3 547 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 PCDHA10Q9Y5I2 948 aa21.5■■□□□ 1.03
HDAC1-201ENST00000373548 K7ENM7 598 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms