RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 FIZ1Q96SL8 496 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 BCAS3Q9H6U6 928 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 NAGPAQ9UK23 515 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 TMEM59LQ9UK28 342 aa13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 AJAP1Q9UKB5 411 aaPredicted RBP13.75□□□□□ -0.21
TSPAN6-201ENST00000373020 POLD1P28340 1107 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 ZNF131P52739 623 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 KIAA1755Q5JYT7 1200 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 OLIG1Q8TAK6 271 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 MKNK1Q9BUB5 465 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 SLITRK3O94933 977 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 ZNF76P36508 570 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 MRPS25P82663 173 aaKnown RBP13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 KCNA1Q09470 495 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 AOC3Q16853 763 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 DCAF17Q5H9S7 520 aaPredicted RBP13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 LRRC31Q6UY01 552 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 GOLGA6L1Q8N7Z2 621 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 TSEN2Q8NCE0 465 aaKnown RBP13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 PRMT6Q96LA8 375 aaPredicted RBP13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 RANBP17Q9H2T7 1088 aaKnown RBP13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 GCNT4Q9P109 453 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 TMX2Q9Y320 296 aa13.74□□□□□ -0.21
TSPAN6-201ENST00000373020 A0A0A6YYK5 440 aaPredicted RBP13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 H0YIN7 160 aa13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 GLI1P08151 1106 aa13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 ECE1P42892 770 aa13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 LRCH2Q5VUJ6 765 aa13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 ALS2CLQ60I27 953 aa13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 B3GNT9Q6UX72 402 aa13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 IFT20Q8IY31 132 aa13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 SPICE1Q8N0Z3 855 aa13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 MREGQ8N565 214 aa13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 USP38Q8NB14 1042 aa13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 ARHGEF10LQ9HCE6 1279 aa13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 SEL1LQ9UBV2 794 aa13.73□□□□□ -0.21
TSPAN6-201ENST00000373020 YDJCA8MPS7 323 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 GOLGA8KD6RF30 607 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 FLOT1O75955 427 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 GFPT2O94808 682 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 FAM13AO94988 1023 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 KIF4AO95239 1232 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 PRELPP51888 382 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 SF3B2Q13435 895 aaKnown RBP13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 CTTNQ14247 550 aaKnown RBP13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 ENOX2Q16206 610 aaKnown RBP13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 IFI16Q16666 785 aaKnown RBP13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 ALKBH5Q6P6C2 394 aaKnown RBP13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 FAM76AQ8TAV0 307 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 DYDC2Q96IM9 177 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 HINFPQ9BQA5 517 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 INTUQ9ULD6 942 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 PACSIN2Q9UNF0 486 aaPredicted RBP13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 RGPD3A6NKT7 1758 aaPredicted RBP13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 RGPD4Q7Z3J3 1758 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 GOLGA6CA6NDK9 693 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 CLIC2O15247 247 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 PLA2G6O60733 806 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 HEXIM1O94992 359 aaKnown RBP13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 GOLGA6DP0CG33 693 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 PAK2Q13177 524 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 MSL1Q68DK7 614 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 SLFN11Q7Z7L1 901 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 ACER1Q8TDN7 264 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 PIGOQ8TEQ8 1089 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 PARVGQ9HBI0 331 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 GOLGA6AQ9NYA3 693 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 KCND2Q9NZV8 630 aa13.72□□□□□ -0.21
TSPAN6-201ENST00000373020 BHMG1C9JSJ3 638 aaPredicted RBP13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 GCOM1H8Y6P7 765 aaPredicted RBP13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 POLR2MP0CAP2 368 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 FERP16591 822 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 NMT1P30419 496 aaKnown RBP13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 PSMC2P35998 433 aaKnown RBP13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 CARSP49589 748 aaKnown RBP13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 RPS6KA1Q15418 735 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 TCERG1LQ5VWI1 586 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 FAM186BQ8IYM0 893 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 TPCN2Q8NHX9 752 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 CNKSR1Q969H4 720 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 PBKQ96KB5 322 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 SYT11Q9BT88 431 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 DEFB129Q9H1M3 183 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 GOPCQ9HD26 462 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 DMAC2Q9NW81 257 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 ODF2LQ9ULJ1 636 aa13.71□□□□□ -0.21
TSPAN6-201ENST00000373020 SHTN1A0MZ66 631 aa13.71□□□□□ -0.22
TSPAN6-201ENST00000373020 DDX3XO00571 662 aaKnown RBP eCLIP13.71□□□□□ -0.221e-8■■■■■ 34.2
TSPAN6-201ENST00000373020 OPA1O60313 960 aa13.71□□□□□ -0.22
TSPAN6-201ENST00000373020 CFBP00751 764 aa13.71□□□□□ -0.22
TSPAN6-201ENST00000373020 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.22
TSPAN6-201ENST00000373020 TNNC1P63316 161 aa13.71□□□□□ -0.22
TSPAN6-201ENST00000373020 PPFIA1Q13136 1202 aa13.71□□□□□ -0.22
TSPAN6-201ENST00000373020 CEP55Q53EZ4 464 aa13.71□□□□□ -0.22
TSPAN6-201ENST00000373020 EIF1ADQ8N9N8 165 aaKnown RBP13.71□□□□□ -0.22
TSPAN6-201ENST00000373020 ACTRT1Q8TDG2 376 aa13.71□□□□□ -0.22
TSPAN6-201ENST00000373020 SCFD2Q8WU76 684 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms