RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 BARGINQ6ZT62 677 aa17.27■□□□□ 0.35
PABPC4-201ENST00000372856 OR2W6PQ8NHA6 318 aa17.27■□□□□ 0.35
PABPC4-201ENST00000372856 CCT8L2Q96SF2 557 aa17.27■□□□□ 0.35
PABPC4-201ENST00000372856 ATP6V0A4Q9HBG4 840 aa17.27■□□□□ 0.35
PABPC4-201ENST00000372856 POTEFA5A3E0 1075 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 POTEIP0CG38 1075 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 SNHG28P0DPA3 235 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 CLK2P49760 499 aaKnown RBP17.26■□□□□ 0.35
PABPC4-201ENST00000372856 POTEGQ6S5H5 508 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 POTEEQ6S8J3 1075 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 ZNF513Q8N8E2 541 aaPredicted RBP17.26■□□□□ 0.35
PABPC4-201ENST00000372856 CNBD1Q8NA66 436 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 HDAC9Q9UKV0 1011 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 FAM170AA1A519 330 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 MEIS1O00470 390 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 BACH1O14867 736 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 RGL2O15211 777 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 BUB1BO60566 1050 aaPredicted RBP17.26■□□□□ 0.35
PABPC4-201ENST00000372856 MED24O75448 989 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 KIF4AO95239 1232 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 SF3A3Q12874 501 aaKnown RBP eCLIP17.26■□□□□ 0.359e-9■■■■□ 24.1
PABPC4-201ENST00000372856 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
PABPC4-201ENST00000372856 MREGQ8N565 214 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 WHAMMQ8TF30 809 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 NSMCE1Q8WV22 266 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 ATP6V1G3Q96LB4 118 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 CCNL1Q9UK58 526 aaPredicted RBP17.26■□□□□ 0.35
PABPC4-201ENST00000372856 UPP2O95045 317 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 RFC4P35249 363 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 MARSP56192 900 aaKnown RBP17.26■□□□□ 0.35
PABPC4-201ENST00000372856 ARSHQ5FYA8 562 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 IRF2BP2Q7Z5L9 587 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 RPGRQ92834 1020 aaKnown RBP17.26■□□□□ 0.35
PABPC4-201ENST00000372856 TAF1DQ9H5J8 278 aaPredicted RBP17.26■□□□□ 0.35
PABPC4-201ENST00000372856 G3BP2Q9UN86 482 aaKnown RBP17.26■□□□□ 0.35
PABPC4-201ENST00000372856 DAGLAQ9Y4D2 1042 aa17.26■□□□□ 0.35
PABPC4-201ENST00000372856 KDM3AQ9Y4C1 1321 aa17.25■□□□□ 0.35
PABPC4-201ENST00000372856 DCAF17Q5H9S7 520 aaPredicted RBP17.25■□□□□ 0.35
PABPC4-201ENST00000372856 SPATS2Q86XZ4 545 aaKnown RBP17.25■□□□□ 0.35
PABPC4-201ENST00000372856 STAMBPL1Q96FJ0 436 aa17.25■□□□□ 0.35
PABPC4-201ENST00000372856 EPN3Q9H201 632 aa17.25■□□□□ 0.35
PABPC4-201ENST00000372856 GGA1Q9UJY5 639 aa17.25■□□□□ 0.35
PABPC4-201ENST00000372856 TTLL1O95922 423 aa17.25■□□□□ 0.35
PABPC4-201ENST00000372856 UCHL3P15374 230 aa17.25■□□□□ 0.35
PABPC4-201ENST00000372856 A6NNZ2 444 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 DNM1LO00429 736 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 PPP1R37O75864 691 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 PSMC6P62333 389 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 TUBB8Q3ZCM7 444 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 HYIQ5T013 277 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 TCERG1LQ5VWI1 586 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 CAPRIN2Q6IMN6 1127 aaKnown RBP17.24■□□□□ 0.35
PABPC4-201ENST00000372856 DDX47Q9H0S4 455 aaKnown RBP17.24■□□□□ 0.35
PABPC4-201ENST00000372856 DDX4Q9NQI0 724 aaKnown RBP17.24■□□□□ 0.35
PABPC4-201ENST00000372856 ARMCX3Q9UH62 379 aaPredicted RBP17.24■□□□□ 0.35
PABPC4-201ENST00000372856 TMEM59LQ9UK28 342 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.24■□□□□ 0.35
PABPC4-201ENST00000372856 ZBTB5O15062 677 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 IL1R1P14778 569 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 HOXA7P31268 230 aaPredicted RBP17.24■□□□□ 0.35
PABPC4-201ENST00000372856 PABPC4Q13310 644 aaKnown RBP eCLIP17.24■□□□□ 0.359e-8■■■■□ 24.2
PABPC4-201ENST00000372856 ALKBH5Q6P6C2 394 aaKnown RBP17.24■□□□□ 0.35
PABPC4-201ENST00000372856 NLRP14Q86W24 1093 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 CD302Q8IX05 232 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 BCAS3Q9H6U6 928 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 NAGPAQ9UK23 515 aa17.24■□□□□ 0.35
PABPC4-201ENST00000372856 HSD17B3P37058 310 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 HSPA9P38646 679 aaKnown RBP17.23■□□□□ 0.35
PABPC4-201ENST00000372856 USP11P51784 963 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 RPS6KA3P51812 740 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 GTF2IP78347 998 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 GABPAQ06546 454 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 PTGISQ16647 500 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 RBM46Q8TBY0 533 aaKnown RBP17.23■□□□□ 0.35
PABPC4-201ENST00000372856 MYCBPAPQ8TBZ2 947 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 ATXN2Q99700 1313 aaKnown RBP17.23■□□□□ 0.35
PABPC4-201ENST00000372856 TNRC6CQ9HCJ0 1690 aaKnown RBP17.23■□□□□ 0.35
PABPC4-201ENST00000372856 SART1O43290 800 aaKnown RBP17.23■□□□□ 0.35
PABPC4-201ENST00000372856 MYBP10242 640 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 ECHS1P30084 290 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 SLC8A1P32418 973 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 MDH1P40925 334 aaKnown RBP17.23■□□□□ 0.35
PABPC4-201ENST00000372856 EXOC3L4Q17RC7 722 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 PPP1R18Q6NYC8 613 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 SLF2Q8IX21 1173 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 METTL13Q8N6R0 699 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 C3orf20Q8ND61 904 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 FAM163AQ96GL9 167 aaPredicted RBP17.23■□□□□ 0.35
PABPC4-201ENST00000372856 ISCUQ9H1K1 167 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 NEUROG2Q9H2A3 272 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 DHX36Q9H2U1 1008 aaKnown RBP17.23■□□□□ 0.35
PABPC4-201ENST00000372856 GAKO14976 1311 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 IGKV6D-41A0A0C4DH26 115 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 GOLGA6L10A6NI86 522 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 C6orf229H3BNL8 230 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 PON1P27169 355 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 ITGB3BPQ13352 177 aaPredicted RBP17.23■□□□□ 0.35
PABPC4-201ENST00000372856 GJB7Q6PEY0 223 aa17.23■□□□□ 0.35
PABPC4-201ENST00000372856 C15orf52Q6ZUT6 534 aaKnown RBP17.23■□□□□ 0.35
PABPC4-201ENST00000372856 POLLQ9UGP5 575 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms