RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 TMEM179Q6ZVK1 233 aa18.27■□□□□ 0.51
PCIF1-201ENST00000372409 ATAD5Q96QE3 1844 aa18.27■□□□□ 0.51
PCIF1-201ENST00000372409 FOSP01100 380 aaPredicted RBP18.26■□□□□ 0.51
PCIF1-201ENST00000372409 PDCLQ13371 301 aa18.26■□□□□ 0.51
PCIF1-201ENST00000372409 VPS36Q86VN1 386 aa18.26■□□□□ 0.51
PCIF1-201ENST00000372409 TPH2Q8IWU9 490 aa18.26■□□□□ 0.51
PCIF1-201ENST00000372409 METTL14Q9HCE5 456 aaKnown RBP18.26■□□□□ 0.51
PCIF1-201ENST00000372409 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
PCIF1-201ENST00000372409 EIF3HO15372 352 aaKnown RBP eCLIP18.26■□□□□ 0.51
PCIF1-201ENST00000372409 GFPT2O94808 682 aa18.26■□□□□ 0.51
PCIF1-201ENST00000372409 MYCT1Q8N699 235 aa18.26■□□□□ 0.51
PCIF1-201ENST00000372409 ZNF622Q969S3 477 aaKnown RBP eCLIP18.26■□□□□ 0.51
PCIF1-201ENST00000372409 SLC35C1Q96A29 364 aa18.26■□□□□ 0.51
PCIF1-201ENST00000372409 SHTN1A0MZ66 631 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 ZNF233A6NK53 670 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 TRIM37O94972 964 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 FAM13AO94988 1023 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 PEX26Q7Z412 305 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 MAATS1Q7Z4T9 603 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 U2AF1L4Q8WU68 220 aaKnown RBP18.25■□□□□ 0.51
PCIF1-201ENST00000372409 VAV3Q9UKW4 847 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 GRIN2DO15399 1336 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 GH2P01242 217 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 BMP3P12645 472 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 NMT1P30419 496 aaKnown RBP18.25■□□□□ 0.51
PCIF1-201ENST00000372409 ALDH1B1P30837 517 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 CORO7P57737 925 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 ZC2HC1CQ53FD0 456 aaPredicted RBP18.25■□□□□ 0.51
PCIF1-201ENST00000372409 SLC27A3Q5K4L6 730 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 MCTP2Q6DN12 878 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 KSR1Q8IVT5 923 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 IQCKQ8N0W5 287 aa18.25■□□□□ 0.51
PCIF1-201ENST00000372409 BTNL10A8MVZ5 291 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 EBAG9O00559 213 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 ZEB2O60315 1214 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 EYA4O95677 639 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 H2AFZP0C0S5 128 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 RINT1Q6NUQ1 792 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 SAMD1Q6SPF0 538 aaPredicted RBP18.24■□□□□ 0.51
PCIF1-201ENST00000372409 H2AFVQ71UI9 128 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 PBKQ96KB5 322 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 CENPHQ9H3R5 247 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 SIX2Q9NPC8 291 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 ZBTB39O15060 712 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 CFBP00751 764 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 POLD1P28340 1107 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 MAGEA9P43362 315 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 SLC20A2Q08357 652 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 DAAM2Q86T65 1068 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 TPCN2Q8NHX9 752 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 WHAMMQ8TF30 809 aa18.24■□□□□ 0.51
PCIF1-201ENST00000372409 OPLAHO14841 1288 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 UBXN2AP68543 259 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 TATDN1Q6P1N9 297 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 PODNQ7Z5L7 613 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 DDX42Q86XP3 938 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCIF1-201ENST00000372409 FAM186BQ8IYM0 893 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 METTL13Q8N6R0 699 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 LRRC57Q8N9N7 239 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 TAF1DQ9H5J8 278 aaPredicted RBP18.23■□□□□ 0.51
PCIF1-201ENST00000372409 SAMM50Q9Y512 469 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 STK24Q9Y6E0 443 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 SLC16A3O15427 465 aaKnown RBP18.23■□□□□ 0.51
PCIF1-201ENST00000372409 PRKCIP41743 596 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 ERVK-9P63128 1117 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 JAG1P78504 1218 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 PIK3R5Q8WYR1 880 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 DYDC2Q96IM9 177 aa18.23■□□□□ 0.51
PCIF1-201ENST00000372409 POLR3CQ9BUI4 534 aaPredicted RBP18.23■□□□□ 0.51
PCIF1-201ENST00000372409 DDX47Q9H0S4 455 aaKnown RBP18.23■□□□□ 0.51
PCIF1-201ENST00000372409 TDRD3Q9H7E2 651 aaKnown RBP18.23■□□□□ 0.51
PCIF1-201ENST00000372409 NOC2LQ9Y3T9 749 aaKnown RBP18.23■□□□□ 0.51
PCIF1-201ENST00000372409 PGRMC1O00264 195 aaKnown RBP18.22■□□□□ 0.51
PCIF1-201ENST00000372409 KRIT1O00522 736 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 TGFB1I1O43294 461 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 PPP1R12BO60237 982 aaPredicted RBP18.22■□□□□ 0.51
PCIF1-201ENST00000372409 BMT2Q1RMZ1 405 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 RBM26Q5T8P6 1007 aaKnown RBP18.22■□□□□ 0.51
PCIF1-201ENST00000372409 GMCL1P1Q8NEA9 526 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 GMCL1Q96IK5 515 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 TMEM59LQ9UK28 342 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 PLAAQ9Y263 795 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 SIPA1L1O43166 1804 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 ANKRD31Q8N7Z5 1873 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 AFF2P51816 1311 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 DDX3XO00571 662 aaKnown RBP eCLIP18.22■□□□□ 0.514e-7■■■■□ 21.7
PCIF1-201ENST00000372409 CIITAP33076 1130 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 COG2Q14746 738 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 CEP85LQ5SZL2 805 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 LRCH2Q5VUJ6 765 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 BBXQ8WY36 941 aaPredicted RBP18.22■□□□□ 0.51
PCIF1-201ENST00000372409 IDI2Q9BXS1 227 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 PRR12Q9ULL5 1215 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 CES2O00748 559 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 PSMC2P35998 433 aaKnown RBP18.22■□□□□ 0.51
PCIF1-201ENST00000372409 STAT1P42224 750 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 CYP2J2P51589 502 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 JAM2P57087 298 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 SKOR1P84550 965 aa18.22■□□□□ 0.51
PCIF1-201ENST00000372409 PPARDQ03181 441 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms