RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 NOD1Q9Y239 953 aa10.71□□□□□ -0.69
TMEM254-201ENST00000372273 CHD9Q3L8U1 2897 aa10.71□□□□□ -0.7
TMEM254-201ENST00000372273 POTEB3A0JP26 581 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 ZBTB42B2RXF5 422 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 PSAPP07602 524 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 TMEM62Q0P6H9 643 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 PPP2R5CQ13362 524 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 POTEBQ6S5H4 581 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 RUFY4Q6ZNE9 571 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 FSIP1Q8NA03 581 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 MRPS27Q92552 414 aaKnown RBP10.7□□□□□ -0.7
TMEM254-201ENST00000372273 ATP6V0A1Q93050 837 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 PPP1R16BQ96T49 567 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 TBX21Q9UL17 535 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 MAFBQ9Y5Q3 323 aaPredicted RBP10.7□□□□□ -0.7
TMEM254-201ENST00000372273 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.7□□□□□ -0.7
TMEM254-201ENST00000372273 ALPK3Q96L96 1907 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 SCN10AQ9Y5Y9 1956 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 MARCKSP29966 332 aaPredicted RBP10.7□□□□□ -0.7
TMEM254-201ENST00000372273 MAGEA10P43363 369 aaPredicted RBP10.7□□□□□ -0.7
TMEM254-201ENST00000372273 EPHB4P54760 987 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 PPFIA1Q13136 1202 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 GRIK4Q16099 956 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 RILPL1Q5EBL4 403 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 PLA2G4FQ68DD2 849 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 ADALQ6DHV7 355 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 TPH2Q8IWU9 490 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 SMAP1Q8IYB5 467 aaPredicted RBP10.7□□□□□ -0.7
TMEM254-201ENST00000372273 DYDC2Q96IM9 177 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 ZNF668Q96K58 619 aaPredicted RBP10.7□□□□□ -0.7
TMEM254-201ENST00000372273 TOX2Q96NM4 488 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 KATNAL1Q9BW62 490 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 HIPK3Q9H422 1215 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 CBX8Q9HC52 389 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.7□□□□□ -0.7
TMEM254-201ENST00000372273 EMSYQ7Z589 1322 aa10.7□□□□□ -0.7
TMEM254-201ENST00000372273 A0A1W2PQ27 194 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 A0A1W2PQ64 194 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 A0A1W2PQD8 194 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 C17orf102A2RUQ5 167 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 SLITRK3O94933 977 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 CTSHP09668 335 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 OR52Z1P0C646 297 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 ACRP10323 421 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 CSF2RAP15509 400 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 RAG1P15918 1043 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 ZNF165P49910 485 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 NPEPPSP55786 919 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 PRKCEQ02156 737 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 ECM1Q16610 540 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 STX1AQ16623 288 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 SPECC1Q5M775 1068 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 CHRDL2Q6WN34 429 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 ANO5Q75V66 913 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 LUZP1Q86V48 1076 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 SLFN12Q8IYM2 578 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 LINC00301Q8NCQ3 95 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 PIGOQ8TEQ8 1089 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 FAM49AQ9H0Q0 323 aaPredicted RBP10.69□□□□□ -0.7
TMEM254-201ENST00000372273 WNT8AQ9H1J5 351 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 PRKAG2Q9UGJ0 569 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 PCDHA7Q9UN72 937 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 NR2E3Q9Y5X4 410 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 UNC80Q8N2C7 3258 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 VWA3AA6NCI4 1184 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 GOLGA6L19H0YKK7 550 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 TBX3O15119 743 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 SPTLC2O15270 562 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 STBD1O95210 358 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 CAPN2P17655 700 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 TRAPPC10P48553 1259 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 ADAM17P78536 824 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 ZRSR1Q15695 479 aaKnown RBP10.69□□□□□ -0.7
TMEM254-201ENST00000372273 PLPPR4Q7Z2D5 763 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 AFAP1L1Q8TED9 768 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 PLIN2Q99541 437 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 EIF2AK1Q9BQI3 630 aaKnown RBP10.69□□□□□ -0.7
TMEM254-201ENST00000372273 LXNQ9BS40 222 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 NOC4LQ9BVI4 516 aaKnown RBP10.69□□□□□ -0.7
TMEM254-201ENST00000372273 DNAJC25Q9H1X3 360 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 GOLPH3LQ9H4A5 285 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 POLD4Q9HCU8 107 aa10.69□□□□□ -0.7
TMEM254-201ENST00000372273 REV3LO60673 3130 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 KLRC1P26715 233 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 THPOP40225 353 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 JAK3P52333 1124 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 DRP2Q13474 957 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 DEFB128Q7Z7B8 93 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 CATSPER3Q86XQ3 398 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 LRRC71Q8N4P6 559 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 ATP8B4Q8TF62 1192 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 DNAJB3Q8WWF6 145 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 VWCEQ96DN2 955 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 HSD17B14Q9BPX1 270 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 TUBE1Q9UJT0 475 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 COLQQ9Y215 455 aaPredicted RBP10.68□□□□□ -0.7
TMEM254-201ENST00000372273 GINS2Q9Y248 185 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 MROH7Q68CQ1 1323 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 IGSF9BQ9UPX0 1349 aa10.68□□□□□ -0.7
TMEM254-201ENST00000372273 MED24O75448 989 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms