RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 AGBL3Q8NEM8 1001 aa31.72■■■□□ 2.67
SSBP3-204ENST00000371320 SLC35C1Q96A29 364 aa31.72■■■□□ 2.67
SSBP3-204ENST00000371320 TEKT3Q9BXF9 490 aa31.72■■■□□ 2.67
SSBP3-204ENST00000371320 PDGFDQ9GZP0 370 aaPredicted RBP31.72■■■□□ 2.67
SSBP3-204ENST00000371320 ZNRF3Q9ULT6 936 aa31.72■■■□□ 2.67
SSBP3-204ENST00000371320 SHTN1A0MZ66 631 aa31.71■■■□□ 2.67
SSBP3-204ENST00000371320 CYP2C19P33261 490 aa31.71■■■□□ 2.67
SSBP3-204ENST00000371320 IRF2BP2Q7Z5L9 587 aa31.71■■■□□ 2.67
SSBP3-204ENST00000371320 SPATA4Q8NEY3 305 aa31.71■■■□□ 2.67
SSBP3-204ENST00000371320 ACBD3Q9H3P7 528 aa31.71■■■□□ 2.67
SSBP3-204ENST00000371320 LRRIQ3A6PVS8 624 aaPredicted RBP31.71■■■□□ 2.67
SSBP3-204ENST00000371320 ZMYND10O75800 440 aa31.71■■■□□ 2.67
SSBP3-204ENST00000371320 ASNSP08243 561 aa31.71■■■□□ 2.67
SSBP3-204ENST00000371320 KIAA0753Q2KHM9 967 aa31.71■■■□□ 2.67
SSBP3-204ENST00000371320 NIM1KQ8IY84 436 aa31.71■■■□□ 2.67
SSBP3-204ENST00000371320 SEL1LQ9UBV2 794 aa31.71■■■□□ 2.67
SSBP3-204ENST00000371320 BZW2Q9Y6E2 419 aaKnown RBP31.71■■■□□ 2.67
SSBP3-204ENST00000371320 FRMPD4Q14CM0 1322 aa31.7■■■□□ 2.67
SSBP3-204ENST00000371320 PAFAH1B1P43034 410 aa31.7■■■□□ 2.67
SSBP3-204ENST00000371320 ZC2HC1CQ53FD0 456 aaPredicted RBP31.7■■■□□ 2.67
SSBP3-204ENST00000371320 FBXO41Q8TF61 875 aa31.7■■■□□ 2.67
SSBP3-204ENST00000371320 ZKSCAN7Q9P0L1 754 aaPredicted RBP31.7■■■□□ 2.67
SSBP3-204ENST00000371320 WRAP73Q9P2S5 460 aaPredicted RBP31.7■■■□□ 2.67
SSBP3-204ENST00000371320 ZMYM2Q9UBW7 1377 aa31.7■■■□□ 2.66
SSBP3-204ENST00000371320 MYH10P35580 1976 aa31.69■■■□□ 2.66
SSBP3-204ENST00000371320 IPO5O00410 1097 aaKnown RBP31.69■■■□□ 2.66
SSBP3-204ENST00000371320 DPEP1P16444 411 aa31.69■■■□□ 2.66
SSBP3-204ENST00000371320 KLRC1P26715 233 aa31.69■■■□□ 2.66
SSBP3-204ENST00000371320 PTK2Q05397 1052 aa31.69■■■□□ 2.66
SSBP3-204ENST00000371320 KCND2Q9NZV8 630 aa31.69■■■□□ 2.66
SSBP3-204ENST00000371320 CCPG1Q9ULG6 757 aa31.69■■■□□ 2.66
SSBP3-204ENST00000371320 PALMO75781 387 aa31.69■■■□□ 2.66
SSBP3-204ENST00000371320 PTGER2P43116 358 aa31.69■■■□□ 2.66
SSBP3-204ENST00000371320 TNNT3P45378 269 aaPredicted RBP31.69■■■□□ 2.66
SSBP3-204ENST00000371320 AGBL1Q96MI9 1066 aa31.69■■■□□ 2.66
SSBP3-204ENST00000371320 MXRA8Q9BRK3 442 aa31.69■■■□□ 2.66
SSBP3-204ENST00000371320 VPS33BQ9H267 617 aa31.69■■■□□ 2.66
SSBP3-204ENST00000371320 KCNA3P22001 575 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 PSMC2P35998 433 aaKnown RBP31.68■■■□□ 2.66
SSBP3-204ENST00000371320 NFIL3Q16649 462 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 CCNI2Q6ZMN8 369 aaPredicted RBP31.68■■■□□ 2.66
SSBP3-204ENST00000371320 STXBP4Q6ZWJ1 553 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 FAM186BQ8IYM0 893 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 DEFB129Q9H1M3 183 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 IKZF4Q9H2S9 585 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 PGAP2Q9UHJ9 254 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 PPP1R12BO60237 982 aaPredicted RBP31.68■■■□□ 2.66
SSBP3-204ENST00000371320 ICAM1P05362 532 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 ZNF131P52739 623 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 B3GNT9Q6UX72 402 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 ZNF720Q7Z2F6 126 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 ZNF571Q7Z3V5 609 aaPredicted RBP31.68■■■□□ 2.66
SSBP3-204ENST00000371320 FAM178BQ8IXR5 827 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 BORCS6Q96GS4 357 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 LXNQ9BS40 222 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 PACSIN1Q9BY11 444 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 ZNF341Q9BYN7 854 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 VIPAS39Q9H9C1 493 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 GCNT4Q9P109 453 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 FBXL5Q9UKA1 691 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 ODF2LQ9ULJ1 636 aa31.68■■■□□ 2.66
SSBP3-204ENST00000371320 INPP5BP32019 993 aa31.67■■■□□ 2.66
SSBP3-204ENST00000371320 HSD17B4P51659 736 aa31.67■■■□□ 2.66
SSBP3-204ENST00000371320 MAP3K10Q02779 954 aa31.67■■■□□ 2.66
SSBP3-204ENST00000371320 C10orf76Q5T2E6 689 aa31.67■■■□□ 2.66
SSBP3-204ENST00000371320 ZBTB9Q96C00 473 aa31.67■■■□□ 2.66
SSBP3-204ENST00000371320 RIT2Q99578 217 aa31.67■■■□□ 2.66
SSBP3-204ENST00000371320 GTPBP10A4D1E9 387 aaKnown RBP31.66■■■□□ 2.66
SSBP3-204ENST00000371320 N4BP1O75113 896 aaKnown RBP31.66■■■□□ 2.66
SSBP3-204ENST00000371320 MATR3P43243 847 aaKnown RBP eCLIP31.66■■■□□ 2.663e-6■■■□□ 14.6
SSBP3-204ENST00000371320 GYS2P54840 703 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 NBPF9Q3BBW0 867 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 HSP90B2PQ58FF3 399 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 CCDC102AQ96A19 550 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 FIZ1Q96SL8 496 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 SIX2Q9NPC8 291 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 SMARCAL1Q9NZC9 954 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 UBE4BO95155 1302 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 KIF13BQ9NQT8 1826 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 ODR4Q5SWX8 454 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 KSR1Q8IVT5 923 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 RBM46Q8TBY0 533 aaKnown RBP31.66■■■□□ 2.66
SSBP3-204ENST00000371320 LRRC1Q9BTT6 524 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 EHD2Q9NZN4 543 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 PCDHGC5Q9Y5F6 944 aa31.66■■■□□ 2.66
SSBP3-204ENST00000371320 WNT10BO00744 389 aa31.65■■■□□ 2.66
SSBP3-204ENST00000371320 HS2ST1Q7LGA3 356 aa31.65■■■□□ 2.66
SSBP3-204ENST00000371320 BANK1Q8NDB2 785 aa31.65■■■□□ 2.66
SSBP3-204ENST00000371320 ZBED3Q96IU2 234 aaPredicted RBP31.65■■■□□ 2.66
SSBP3-204ENST00000371320 ADAM21Q9UKJ8 722 aa31.65■■■□□ 2.66
SSBP3-204ENST00000371320 ARHGEF35A5YM69 484 aa31.64■■■□□ 2.66
SSBP3-204ENST00000371320 ERICH4A6NGS2 130 aa31.64■■■□□ 2.66
SSBP3-204ENST00000371320 ITGB5P18084 799 aa31.64■■■□□ 2.66
SSBP3-204ENST00000371320 CFAP221Q4G0U5 840 aa31.64■■■□□ 2.66
SSBP3-204ENST00000371320 MKNK1Q9BUB5 465 aa31.64■■■□□ 2.66
SSBP3-204ENST00000371320 VPS18Q9P253 973 aa31.64■■■□□ 2.66
SSBP3-204ENST00000371320 RNF14Q9UBS8 474 aa31.64■■■□□ 2.66
SSBP3-204ENST00000371320 ZNF536O15090 1300 aa31.64■■■□□ 2.66
SSBP3-204ENST00000371320 DDX39AO00148 427 aaKnown RBP31.64■■■□□ 2.66
SSBP3-204ENST00000371320 FTCDO95954 541 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms