RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 NT5C3AQ9H0P0 336 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 ANKEF1Q9NU02 776 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 CLIC4Q9Y696 253 aa15.39■□□□□ 0.05
SSR4-202ENST00000370085 MORC2Q9Y6X9 1032 aaPredicted RBP15.39■□□□□ 0.05
SSR4-202ENST00000370085 GAS2O43903 313 aaKnown RBP15.38■□□□□ 0.05
SSR4-202ENST00000370085 YEATS4O95619 227 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 CKBP12277 381 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 SELPP16109 830 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 UBA7P41226 1012 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 NASPP49321 788 aaPredicted RBP15.38■□□□□ 0.05
SSR4-202ENST00000370085 PKP1Q13835 747 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 SLC39A14Q15043 492 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 MTERF2Q49AM1 385 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 XKR9Q5GH70 373 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 IER5Q5VY09 327 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 RPAINQ86UA6 219 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 CATSPER3Q86XQ3 398 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 METTL13Q8N6R0 699 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 RASSF8Q8NHQ8 419 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 KCNG4Q8TDN1 519 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 BADQ92934 168 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 CALML4Q96GE6 196 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 USP28Q96RU2 1077 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 CYP26B1Q9NR63 512 aa15.38■□□□□ 0.05
SSR4-202ENST00000370085 SRPRBQ9Y5M8 271 aaKnown RBP15.38■□□□□ 0.05
SSR4-202ENST00000370085 LOXHD1Q8IVV2 1947 aa15.37■□□□□ 0.05
SSR4-202ENST00000370085 SPTLC2O15270 562 aa15.37■□□□□ 0.05
SSR4-202ENST00000370085 PFKMP08237 780 aa15.37■□□□□ 0.05
SSR4-202ENST00000370085 CYP2C18P33260 490 aa15.37■□□□□ 0.05
SSR4-202ENST00000370085 RFC5P40937 340 aa15.37■□□□□ 0.05
SSR4-202ENST00000370085 POLGP54098 1239 aaPredicted RBP15.37■□□□□ 0.05
SSR4-202ENST00000370085 KRT85P78386 507 aa15.37■□□□□ 0.05
SSR4-202ENST00000370085 CDC42EP1Q00587 391 aa15.37■□□□□ 0.05
SSR4-202ENST00000370085 MDM2Q00987 491 aaPredicted RBP15.37■□□□□ 0.05
SSR4-202ENST00000370085 FOXD4L6Q3SYB3 417 aaPredicted RBP15.37■□□□□ 0.05
SSR4-202ENST00000370085 MARCH8Q5T0T0 291 aa15.37■□□□□ 0.05
SSR4-202ENST00000370085 FOXD4L3Q6VB84 417 aaPredicted RBP15.37■□□□□ 0.05
SSR4-202ENST00000370085 ANO5Q75V66 913 aa15.37■□□□□ 0.05
SSR4-202ENST00000370085 LRRC8DQ7L1W4 858 aa15.37■□□□□ 0.05
SSR4-202ENST00000370085 KRI1Q8N9T8 703 aaKnown RBP15.37■□□□□ 0.05
SSR4-202ENST00000370085 TRAPPC12Q8WVT3 735 aa15.37■□□□□ 0.05
SSR4-202ENST00000370085 FAM49AQ9H0Q0 323 aaPredicted RBP15.37■□□□□ 0.05
SSR4-202ENST00000370085 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
SSR4-202ENST00000370085 EVPLQ92817 2033 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 RSPH10B2B2RC85 870 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 C22orf31O95567 290 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 RSPH10BP0C881 870 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 NCLP19338 710 aaKnown RBP15.36■□□□□ 0.05
SSR4-202ENST00000370085 MARCKSP29966 332 aaPredicted RBP15.36■□□□□ 0.05
SSR4-202ENST00000370085 MAGEA10P43363 369 aaPredicted RBP15.36■□□□□ 0.05
SSR4-202ENST00000370085 CCL23P55773 120 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 HIC1Q14526 733 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 PTPAQ15257 358 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 TARBP2Q15633 366 aaKnown RBP15.36■□□□□ 0.05
SSR4-202ENST00000370085 EFCAB12Q6NXP0 572 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 LINC00301Q8NCQ3 95 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 DNAJB3Q8WWF6 145 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 CTAGE1Q96RT6 745 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 FTOQ9C0B1 505 aaKnown RBP eCLIP15.36■□□□□ 0.05
SSR4-202ENST00000370085 SUGCTQ9HAC7 445 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 TFIP11Q9UBB9 837 aaKnown RBP15.36■□□□□ 0.05
SSR4-202ENST00000370085 DBR1Q9UK59 544 aaKnown RBP15.36■□□□□ 0.05
SSR4-202ENST00000370085 DNM3Q9UQ16 869 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 AKT3Q9Y243 479 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 LTBP2Q14767 1821 aa15.36■□□□□ 0.05
SSR4-202ENST00000370085 ARHGEF35A5YM69 484 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 ZBTB42B2RXF5 422 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 PPP6R2O75170 966 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 MED24O75448 989 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 DGAT1O75907 488 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 IQCF3P0C7M6 154 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 SPATA31C1P0DKV0 1188 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 ZRSR1Q15695 479 aaKnown RBP15.35■□□□□ 0.05
SSR4-202ENST00000370085 IL17AQ16552 155 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 ZNF618Q5T7W0 954 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 PLA2G4FQ68DD2 849 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 PSRC1Q6PGN9 363 aaPredicted RBP15.35■□□□□ 0.05
SSR4-202ENST00000370085 POTEGQ6S5H5 508 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 RUFY4Q6ZNE9 571 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 CABP7Q86V35 215 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 TCP11Q8WWU5 503 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 DHX38Q92620 1227 aaKnown RBP15.35■□□□□ 0.05
SSR4-202ENST00000370085 UBE2OQ9C0C9 1292 aaKnown RBP15.35■□□□□ 0.05
SSR4-202ENST00000370085 MTIF3Q9H2K0 278 aaKnown RBP15.35■□□□□ 0.05
SSR4-202ENST00000370085 WRAP73Q9P2S5 460 aaPredicted RBP15.35■□□□□ 0.05
SSR4-202ENST00000370085 CCDC39Q9UFE4 941 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 KIAA1024Q9UPX6 916 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 TANC1Q9C0D5 1861 aa15.35■□□□□ 0.05
SSR4-202ENST00000370085 MAFO75444 373 aaPredicted RBP15.34■□□□□ 0.05
SSR4-202ENST00000370085 STBD1O95210 358 aa15.34■□□□□ 0.05
SSR4-202ENST00000370085 CTSHP09668 335 aa15.34■□□□□ 0.05
SSR4-202ENST00000370085 ACTN1P12814 892 aa15.34■□□□□ 0.05
SSR4-202ENST00000370085 CSF2RAP15509 400 aa15.34■□□□□ 0.05
SSR4-202ENST00000370085 NPEPPSP55786 919 aa15.34■□□□□ 0.05
SSR4-202ENST00000370085 MRPS6P82932 125 aaKnown RBP15.34■□□□□ 0.05
SSR4-202ENST00000370085 DNM1Q05193 864 aaKnown RBP15.34■□□□□ 0.05
SSR4-202ENST00000370085 TRIM71Q2Q1W2 868 aaKnown RBP15.34■□□□□ 0.05
SSR4-202ENST00000370085 ODR4Q5SWX8 454 aa15.34■□□□□ 0.05
SSR4-202ENST00000370085 PIGOQ8TEQ8 1089 aa15.34■□□□□ 0.05
SSR4-202ENST00000370085 SCLT1Q96NL6 688 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms