RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ARHGAP1Q07960 439 aa26.47■■□□□ 1.83
SNX3-203ENST00000368979 ACVR2BQ13705 512 aa26.47■■□□□ 1.83
SNX3-203ENST00000368979 TTI2Q6NXR4 508 aa26.47■■□□□ 1.83
SNX3-203ENST00000368979 SPATA33Q96N06 139 aa26.47■■□□□ 1.83
SNX3-203ENST00000368979 APBA2Q99767 749 aa26.47■■□□□ 1.83
SNX3-203ENST00000368979 TIPINQ9BVW5 301 aa26.47■■□□□ 1.83
SNX3-203ENST00000368979 TRIM5Q9C035 493 aa26.47■■□□□ 1.83
SNX3-203ENST00000368979 SAMSN1Q9NSI8 373 aaKnown RBP26.47■■□□□ 1.83
SNX3-203ENST00000368979 FLRT1Q9NZU1 646 aa26.47■■□□□ 1.83
SNX3-203ENST00000368979 TBC1D7Q9P0N9 293 aa26.47■■□□□ 1.83
SNX3-203ENST00000368979 ZSWIM8A7E2V4 1837 aa26.47■■□□□ 1.83
SNX3-203ENST00000368979 USO1O60763 962 aaKnown RBP26.46■■□□□ 1.83
SNX3-203ENST00000368979 HIP1RO75146 1068 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 LGR5O75473 907 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 ADCYAP1R1P41586 468 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 LRRC41Q15345 812 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 CDKAL1Q5VV42 579 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 FAM160B1Q5W0V3 765 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 OLFML2BQ68BL8 750 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 CENPPQ6IPU0 288 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 MYOCDQ8IZQ8 938 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 DAW1Q8N136 415 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 SH2D3AQ9BRG2 576 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 PARVGQ9HBI0 331 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 SEL1LQ9UBV2 794 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 SEPT9Q9UHD8 586 aaPredicted RBP26.46■■□□□ 1.83
SNX3-203ENST00000368979 DOCK3Q8IZD9 2030 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 THSD7BQ9C0I4 1608 aa26.46■■□□□ 1.83
SNX3-203ENST00000368979 BICDL2A1A5D9 508 aa26.45■■□□□ 1.83
SNX3-203ENST00000368979 NOP56O00567 594 aaKnown RBP26.45■■□□□ 1.83
SNX3-203ENST00000368979 IGHA2P01877 340 aa26.45■■□□□ 1.83
SNX3-203ENST00000368979 OATP04181 439 aa26.45■■□□□ 1.83
SNX3-203ENST00000368979 EMID1Q96A84 441 aaPredicted RBP26.45■■□□□ 1.83
SNX3-203ENST00000368979 CEP170P1Q96L14 293 aa26.45■■□□□ 1.83
SNX3-203ENST00000368979 CFHR5Q9BXR6 569 aa26.45■■□□□ 1.83
SNX3-203ENST00000368979 SEMA6BQ9H3T3 888 aa26.45■■□□□ 1.83
SNX3-203ENST00000368979 POLD4Q9HCU8 107 aa26.45■■□□□ 1.83
SNX3-203ENST00000368979 EMSYQ7Z589 1322 aa26.45■■□□□ 1.83
SNX3-203ENST00000368979 MYH9P35579 1960 aaKnown RBP26.45■■□□□ 1.82
SNX3-203ENST00000368979 GH1P01241 217 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 CYP2B6P20813 491 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 STAT5BP51692 787 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 FCGRTP55899 365 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 LACTBP83111 547 aaPredicted RBP26.44■■□□□ 1.82
SNX3-203ENST00000368979 LAMC2Q13753 1193 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 EPM2AIP1Q7L775 607 aaPredicted RBP26.44■■□□□ 1.82
SNX3-203ENST00000368979 TRMT1LQ7Z2T5 733 aaKnown RBP26.44■■□□□ 1.82
SNX3-203ENST00000368979 SCFD1Q8WVM8 642 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 CYP26B1Q9NR63 512 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.44■■□□□ 1.82
SNX3-203ENST00000368979 SFI1A8K8P3 1242 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 CASP5P51878 434 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 FANCCQ00597 558 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 CCL14Q16627 93 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 TPD52L1Q16890 204 aaPredicted RBP26.44■■□□□ 1.82
SNX3-203ENST00000368979 ANKRD40Q6AI12 368 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 FOXR2Q6PJQ5 311 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 MYCT1Q8N699 235 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 MRFAP1L1Q96HT8 127 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 FIZ1Q96SL8 496 aa26.44■■□□□ 1.82
SNX3-203ENST00000368979 DUSP9Q99956 384 aaKnown RBP26.44■■□□□ 1.82
SNX3-203ENST00000368979 ZHX1Q9UKY1 873 aaPredicted RBP26.44■■□□□ 1.82
SNX3-203ENST00000368979 KIF20AO95235 890 aa26.43■■□□□ 1.82
SNX3-203ENST00000368979 PTGS1P23219 599 aa26.43■■□□□ 1.82
SNX3-203ENST00000368979 DUSP28Q4G0W2 176 aa26.43■■□□□ 1.82
SNX3-203ENST00000368979 GJC2Q5T442 439 aaPredicted RBP26.43■■□□□ 1.82
SNX3-203ENST00000368979 IQSEC1Q6DN90 963 aa26.43■■□□□ 1.82
SNX3-203ENST00000368979 TRIM47Q96LD4 638 aa26.43■■□□□ 1.82
SNX3-203ENST00000368979 NIFKQ9BYG3 293 aaKnown RBP26.43■■□□□ 1.82
SNX3-203ENST00000368979 ARHGAP39Q9C0H5 1083 aa26.43■■□□□ 1.82
SNX3-203ENST00000368979 AZI2Q9H6S1 392 aa26.43■■□□□ 1.82
SNX3-203ENST00000368979 SMPD1P17405 629 aa26.42■■□□□ 1.82
SNX3-203ENST00000368979 MAP2K2P36507 400 aa26.42■■□□□ 1.82
SNX3-203ENST00000368979 PSMC4P43686 418 aa26.42■■□□□ 1.82
SNX3-203ENST00000368979 BMT2Q1RMZ1 405 aa26.42■■□□□ 1.82
SNX3-203ENST00000368979 HSP90AA4PQ58FG1 418 aa26.42■■□□□ 1.82
SNX3-203ENST00000368979 PLPPR4Q7Z2D5 763 aa26.42■■□□□ 1.82
SNX3-203ENST00000368979 MRPL44Q9H9J2 332 aaKnown RBP26.42■■□□□ 1.82
SNX3-203ENST00000368979 PDLIM7Q9NR12 457 aa26.42■■□□□ 1.82
SNX3-203ENST00000368979 NKRFO15226 690 aaKnown RBP eCLIP26.41■■□□□ 1.82
SNX3-203ENST00000368979 DGAT1O75907 488 aa26.41■■□□□ 1.82
SNX3-203ENST00000368979 LRRC63Q05C16 580 aa26.41■■□□□ 1.82
SNX3-203ENST00000368979 ZCWPW2Q504Y3 356 aa26.41■■□□□ 1.82
SNX3-203ENST00000368979 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.41■■□□□ 1.82
SNX3-203ENST00000368979 PPTC7Q8NI37 304 aa26.41■■□□□ 1.82
SNX3-203ENST00000368979 DRC1Q96MC2 740 aa26.41■■□□□ 1.82
SNX3-203ENST00000368979 IFNKQ9P0W0 207 aa26.41■■□□□ 1.82
SNX3-203ENST00000368979 TBC1D8O95759 1140 aa26.4■■□□□ 1.82
SNX3-203ENST00000368979 ZNF865P0CJ78 1059 aaPredicted RBP26.4■■□□□ 1.82
SNX3-203ENST00000368979 MYBP10242 640 aa26.4■■□□□ 1.82
SNX3-203ENST00000368979 CDC25BP30305 580 aa26.4■■□□□ 1.82
SNX3-203ENST00000368979 VEGFBP49765 207 aa26.4■■□□□ 1.82
SNX3-203ENST00000368979 CCDC144BQ3MJ40 725 aa26.4■■□□□ 1.82
SNX3-203ENST00000368979 ODR4Q5SWX8 454 aa26.4■■□□□ 1.82
SNX3-203ENST00000368979 MAEAQ7L5Y9 396 aa26.4■■□□□ 1.82
SNX3-203ENST00000368979 NOC3LQ8WTT2 800 aaKnown RBP26.4■■□□□ 1.82
SNX3-203ENST00000368979 FAM167AQ96KS9 214 aa26.4■■□□□ 1.82
SNX3-203ENST00000368979 CEP89Q96ST8 783 aa26.4■■□□□ 1.82
SNX3-203ENST00000368979 KCTD10Q9H3F6 313 aa26.4■■□□□ 1.82
SNX3-203ENST00000368979 THAP9Q9H5L6 903 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms