RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 PIGWQ7Z7B1 504 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 GPIHBP1Q8IV16 184 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 DDX12PQ92771 950 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 CCDC134Q9H6E4 229 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.98■□□□□ 0.63
CHTOP-203ENST00000368690 INTUQ9ULD6 942 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 STXBP5LQ9Y2K9 1186 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 UTP11Q9Y3A2 253 aaKnown RBP18.98■□□□□ 0.63
CHTOP-203ENST00000368690 TRAF5O00463 557 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 KIF3CO14782 793 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 DAPK3O43293 454 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 NUDT17P0C025 328 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 CHRNA5P30532 468 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 FLT3P36888 993 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 MECOMQ03112 1051 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 DHX9Q08211 1270 aaKnown RBP18.98■□□□□ 0.63
CHTOP-203ENST00000368690 CROCCP2Q86T23 111 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 SYCE1Q8N0S2 351 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 PGM2Q96G03 612 aa18.98■□□□□ 0.63
CHTOP-203ENST00000368690 TRIM6Q9C030 488 aaPredicted RBP18.98■□□□□ 0.63
CHTOP-203ENST00000368690 ZNF219Q9P2Y4 722 aaPredicted RBP18.98■□□□□ 0.63
CHTOP-203ENST00000368690 ATP2B4P23634 1241 aa18.97■□□□□ 0.63
CHTOP-203ENST00000368690 ZNF804AQ7Z570 1209 aa18.97■□□□□ 0.63
CHTOP-203ENST00000368690 FAM133AQ8N9E0 248 aa18.97■□□□□ 0.63
CHTOP-203ENST00000368690 TPCN2Q8NHX9 752 aa18.97■□□□□ 0.63
CHTOP-203ENST00000368690 DDX47Q9H0S4 455 aaKnown RBP18.97■□□□□ 0.63
CHTOP-203ENST00000368690 NENFQ9UMX5 172 aa18.97■□□□□ 0.63
CHTOP-203ENST00000368690 COL11A2P13942 1736 aaPredicted RBP18.97■□□□□ 0.63
CHTOP-203ENST00000368690 SMCO2A6NFE2 343 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 OPLAHO14841 1288 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 CALRP27797 417 aaKnown RBP18.96■□□□□ 0.63
CHTOP-203ENST00000368690 GBP2P32456 591 aaPredicted RBP18.96■□□□□ 0.63
CHTOP-203ENST00000368690 PRKCIP41743 596 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 E2F5Q15329 346 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 HIBCHQ6NVY1 386 aaPredicted RBP18.96■□□□□ 0.63
CHTOP-203ENST00000368690 SP8Q8IXZ3 490 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 CCDC63Q8NA47 563 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 TBCKQ8TEA7 893 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 RAB17Q9H0T7 212 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 DIS3Q9Y2L1 958 aaKnown RBP18.96■□□□□ 0.63
CHTOP-203ENST00000368690 DCDC2CA8MYV0 355 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 CTNND1O60716 968 aaKnown RBP18.96■□□□□ 0.63
CHTOP-203ENST00000368690 MMP13P45452 471 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 POU5F1Q01860 360 aaKnown RBP18.96■□□□□ 0.63
CHTOP-203ENST00000368690 COASYQ13057 564 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 CALCRLQ16602 461 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 C12orf60Q5U649 245 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 IRF2BP2Q7Z5L9 587 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 AP1M1Q9BXS5 423 aa18.96■□□□□ 0.63
CHTOP-203ENST00000368690 ZBTB7AO95365 584 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 TXKP42681 527 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 PTK2Q05397 1052 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 PPP1R7Q15435 360 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 TBC1D16Q8TBP0 767 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 DNAJC19Q96DA6 116 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 POLLQ9UGP5 575 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 AMACRQ9UHK6 382 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 NAGPAQ9UK23 515 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 ZNF268Q14587 947 aaPredicted RBP18.95■□□□□ 0.62
CHTOP-203ENST00000368690 FAM26FQ5R3K3 315 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 SOGA3Q5TF21 947 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 KRT79Q5XKE5 535 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 PPP4R3CPQ6ZMV5 832 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 ATXN2LQ8WWM7 1075 aaKnown RBP18.95■□□□□ 0.62
CHTOP-203ENST00000368690 FMO2Q99518 471 aa18.95■□□□□ 0.62
CHTOP-203ENST00000368690 KLRF2D3W0D1 207 aa18.94■□□□□ 0.62
CHTOP-203ENST00000368690 hCG_1984214I3L0E3 225 aa18.94■□□□□ 0.62
CHTOP-203ENST00000368690 FLOT1O75955 427 aa18.94■□□□□ 0.62
CHTOP-203ENST00000368690 ALADP13716 330 aa18.94■□□□□ 0.62
CHTOP-203ENST00000368690 IRX1P78414 480 aaPredicted RBP18.94■□□□□ 0.62
CHTOP-203ENST00000368690 LRRC41Q15345 812 aa18.94■□□□□ 0.62
CHTOP-203ENST00000368690 EDRF1Q3B7T1 1238 aa18.94■□□□□ 0.62
CHTOP-203ENST00000368690 ZNF571Q7Z3V5 609 aaPredicted RBP18.94■□□□□ 0.62
CHTOP-203ENST00000368690 PEX26Q7Z412 305 aa18.94■□□□□ 0.62
CHTOP-203ENST00000368690 ZNF713Q8N859 430 aaPredicted RBP18.94■□□□□ 0.62
CHTOP-203ENST00000368690 MCM9Q9NXL9 1143 aa18.94■□□□□ 0.62
CHTOP-203ENST00000368690 CCDC169A6NNP5 214 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 RIMBP2O15034 1052 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 BUB1BO60566 1050 aaPredicted RBP18.93■□□□□ 0.62
CHTOP-203ENST00000368690 ZKSCAN8Q15776 578 aaPredicted RBP18.93■□□□□ 0.62
CHTOP-203ENST00000368690 CLUL1Q15846 466 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 ALKBH5Q6P6C2 394 aaKnown RBP18.93■□□□□ 0.62
CHTOP-203ENST00000368690 DPP8Q6V1X1 898 aaPredicted RBP18.93■□□□□ 0.62
CHTOP-203ENST00000368690 REXO1Q8N1G1 1221 aaKnown RBP18.93■□□□□ 0.62
CHTOP-203ENST00000368690 CEP120Q8N960 986 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 HES6Q96HZ4 224 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 BAIAP2L1Q9UHR4 511 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 IRS2Q9Y4H2 1338 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 TTI1O43156 1089 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 MMEP08473 750 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 PAX7P23759 505 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 DRG2P55039 364 aaKnown RBP18.93■□□□□ 0.62
CHTOP-203ENST00000368690 ARID5AQ03989 594 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 LRCH2Q5VUJ6 765 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 DPY19L2P1Q6NXN4 242 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 GLIS3Q8NEA6 775 aa18.93■□□□□ 0.62
CHTOP-203ENST00000368690 MOV10L1Q9BXT6 1211 aaKnown RBP18.93■□□□□ 0.62
CHTOP-203ENST00000368690 NSRP1Q9H0G5 558 aaKnown RBP18.93■□□□□ 0.62
CHTOP-203ENST00000368690 PABPC3Q9H361 631 aaKnown RBP18.93■□□□□ 0.62
CHTOP-203ENST00000368690 SAMD15Q9P1V8 674 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms