RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CAMK1Q14012 370 aa18.2■□□□□ 0.5
CKS1B-202ENST00000368436 ZNF746Q6NUN9 644 aaPredicted RBP18.2■□□□□ 0.5
CKS1B-202ENST00000368436 SWSAP1Q6NVH7 229 aa18.2■□□□□ 0.5
CKS1B-202ENST00000368436 MIS18BP1Q6P0N0 1132 aa18.2■□□□□ 0.5
CKS1B-202ENST00000368436 PDXDC2PQ6P474 469 aa18.2■□□□□ 0.5
CKS1B-202ENST00000368436 CCDC12Q8WUD4 166 aaPredicted RBP18.2■□□□□ 0.5
CKS1B-202ENST00000368436 BRF1Q92994 677 aa18.2■□□□□ 0.5
CKS1B-202ENST00000368436 JAKMIP1Q96N16 626 aaKnown RBP18.2■□□□□ 0.5
CKS1B-202ENST00000368436 AGXT2Q9BYV1 514 aa18.2■□□□□ 0.5
CKS1B-202ENST00000368436 ERVK-5Q9HDB9 667 aa18.2■□□□□ 0.5
CKS1B-202ENST00000368436 TBC1D22BQ9NU19 505 aa18.2■□□□□ 0.5
CKS1B-202ENST00000368436 CLDND1Q9NY35 253 aa18.2■□□□□ 0.5
CKS1B-202ENST00000368436 SETQ01105 290 aaPredicted RBP18.19■□□□□ 0.5
CKS1B-202ENST00000368436 NTRK3Q16288 839 aa18.19■□□□□ 0.5
CKS1B-202ENST00000368436 BLOC1S2Q6QNY1 142 aa18.19■□□□□ 0.5
CKS1B-202ENST00000368436 REXO1Q8N1G1 1221 aaKnown RBP18.19■□□□□ 0.5
CKS1B-202ENST00000368436 ZNF577Q9BSK1 485 aa18.19■□□□□ 0.5
CKS1B-202ENST00000368436 CDHR5Q9HBB8 845 aa18.19■□□□□ 0.5
CKS1B-202ENST00000368436 PLXNA4Q9HCM2 1894 aa18.19■□□□□ 0.5
CKS1B-202ENST00000368436 ALG13Q9NP73 1137 aaKnown RBP18.19■□□□□ 0.5
CKS1B-202ENST00000368436 FAM50BQ9Y247 325 aa18.19■□□□□ 0.5
CKS1B-202ENST00000368436 NOC2LQ9Y3T9 749 aaKnown RBP18.19■□□□□ 0.5
CKS1B-202ENST00000368436 ARIH1Q9Y4X5 557 aaPredicted RBP18.19■□□□□ 0.5
CKS1B-202ENST00000368436 MAFBQ9Y5Q3 323 aaPredicted RBP18.19■□□□□ 0.5
CKS1B-202ENST00000368436 RPS6KB1P23443 525 aa18.18■□□□□ 0.5
CKS1B-202ENST00000368436 DNAJB1P25685 340 aa18.18■□□□□ 0.5
CKS1B-202ENST00000368436 GNA11P29992 359 aa18.18■□□□□ 0.5
CKS1B-202ENST00000368436 CIITAP33076 1130 aa18.18■□□□□ 0.5
CKS1B-202ENST00000368436 PLA2G5P39877 138 aa18.18■□□□□ 0.5
CKS1B-202ENST00000368436 SARSP49591 514 aaKnown RBP18.18■□□□□ 0.5
CKS1B-202ENST00000368436 NFX1Q12986 1120 aaKnown RBP18.18■□□□□ 0.5
CKS1B-202ENST00000368436 TMEM266Q2M3C6 531 aa18.18■□□□□ 0.5
CKS1B-202ENST00000368436 EP400NLQ6ZTU2 488 aa18.18■□□□□ 0.5
CKS1B-202ENST00000368436 SMAP1Q8IYB5 467 aaPredicted RBP18.18■□□□□ 0.5
CKS1B-202ENST00000368436 SPPL3Q8TCT6 385 aa18.18■□□□□ 0.5
CKS1B-202ENST00000368436 TMEM40Q8WWA1 233 aa18.18■□□□□ 0.5
CKS1B-202ENST00000368436 BBXQ8WY36 941 aaPredicted RBP18.18■□□□□ 0.5
CKS1B-202ENST00000368436 RGS18Q9NS28 235 aa18.18■□□□□ 0.5
CKS1B-202ENST00000368436 PRKAG3Q9UGI9 489 aa18.18■□□□□ 0.5
CKS1B-202ENST00000368436 C19orf67A6NJJ6 358 aa18.17■□□□□ 0.5
CKS1B-202ENST00000368436 MGEA5O60502 916 aa18.17■□□□□ 0.5
CKS1B-202ENST00000368436 RPS6KA5O75582 802 aa18.17■□□□□ 0.5
CKS1B-202ENST00000368436 C22orf31O95567 290 aa18.17■□□□□ 0.5
CKS1B-202ENST00000368436 ITGB1P05556 798 aa18.17■□□□□ 0.5
CKS1B-202ENST00000368436 SSTR3P32745 418 aaPredicted RBP18.17■□□□□ 0.5
CKS1B-202ENST00000368436 EVCP57679 992 aa18.17■□□□□ 0.5
CKS1B-202ENST00000368436 DLX2Q07687 328 aaPredicted RBP18.17■□□□□ 0.5
CKS1B-202ENST00000368436 PAN2Q504Q3 1202 aaKnown RBP18.17■□□□□ 0.5
CKS1B-202ENST00000368436 ODR4Q5SWX8 454 aa18.17■□□□□ 0.5
CKS1B-202ENST00000368436 PHKBQ93100 1093 aa18.17■□□□□ 0.5
CKS1B-202ENST00000368436 UIMC1Q96RL1 719 aa18.17■□□□□ 0.5
CKS1B-202ENST00000368436 RNF26Q9BY78 433 aaPredicted RBP18.17■□□□□ 0.5
CKS1B-202ENST00000368436 LRFN2Q9ULH4 789 aa18.17■□□□□ 0.5
CKS1B-202ENST00000368436 ST3GAL5Q9UNP4 418 aa18.17■□□□□ 0.5
CKS1B-202ENST00000368436 PCDHA10Q9Y5I2 948 aa18.17■□□□□ 0.5
CKS1B-202ENST00000368436 EDIL3O43854 480 aa18.16■□□□□ 0.5
CKS1B-202ENST00000368436 GATMP50440 423 aa18.16■□□□□ 0.5
CKS1B-202ENST00000368436 CRYBB1P53674 252 aaPredicted RBP18.16■□□□□ 0.5
CKS1B-202ENST00000368436 ZP2Q05996 745 aa18.16■□□□□ 0.5
CKS1B-202ENST00000368436 ADAM15Q13444 863 aa18.16■□□□□ 0.5
CKS1B-202ENST00000368436 PRR16Q569H4 304 aa18.16■□□□□ 0.5
CKS1B-202ENST00000368436 CKAP2LQ8IYA6 745 aa18.16■□□□□ 0.5
CKS1B-202ENST00000368436 KLHL23Q8NBE8 558 aa18.16■□□□□ 0.5
CKS1B-202ENST00000368436 BICD2Q8TD16 824 aa18.16■□□□□ 0.5
CKS1B-202ENST00000368436 LENG9Q96B70 501 aa18.16■□□□□ 0.5
CKS1B-202ENST00000368436 C1orf112Q9NSG2 853 aa18.16■□□□□ 0.5
CKS1B-202ENST00000368436 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
CKS1B-202ENST00000368436 GINS2Q9Y248 185 aa18.16■□□□□ 0.5
CKS1B-202ENST00000368436 PCDHB7Q9Y5E2 793 aa18.16■□□□□ 0.5
CKS1B-202ENST00000368436 FAM86C2PA6NEL3 165 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 C9IYK1 514 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 GPR182O15218 404 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 GPR32O75388 356 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 PSAPP07602 524 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 ALADP13716 330 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 IFNAR1P17181 557 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 GTF2F1P35269 517 aaKnown RBP eCLIP18.15■□□□□ 0.5
CKS1B-202ENST00000368436 AKAP17AQ02040 695 aaKnown RBP18.15■□□□□ 0.5
CKS1B-202ENST00000368436 SMAD2Q15796 467 aaKnown RBP18.15■□□□□ 0.5
CKS1B-202ENST00000368436 SLC24A5Q71RS6 500 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 ADHFE1Q8IWW8 467 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 RASGRP4Q8TDF6 673 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 FAM122AQ96E09 287 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 ADAM2Q99965 735 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 GABBR1Q9UBS5 961 aa18.15■□□□□ 0.5
CKS1B-202ENST00000368436 LINC01565O15544 149 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 MBTPS2O43462 519 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 TBX10O75333 385 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 PSMA5P28066 241 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 PDIA3P30101 505 aaKnown RBP18.14■□□□□ 0.49
CKS1B-202ENST00000368436 IRS1P35568 1242 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 FAM189BP81408 668 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 KIZQ2M2Z5 673 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 FAM228AQ86W67 206 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 CCDC148Q8NFR7 591 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 POF1BQ8WVV4 589 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 IGFLR1Q9H665 355 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 CEP131Q9UPN4 1083 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 HCN4Q9Y3Q4 1203 aa18.14■□□□□ 0.49
CKS1B-202ENST00000368436 DENND3A2RUS2 1198 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms