RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 MTRQ99707 1265 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 VCXQ9H320 206 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 MRPL47Q9HD33 250 aaKnown RBP13.9□□□□□ -0.18
PTPRK-207ENST00000368226 FAM114A2Q9NRY5 505 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 MOSPD1Q9UJG1 213 aa13.9□□□□□ -0.18
PTPRK-207ENST00000368226 GLI2P10070 1586 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 ARHGAP25P42331 645 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 AP3B2Q13367 1082 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 SPATA17Q96L03 361 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 RMDN2Q96LZ7 410 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 ATP8B3O60423 1300 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 GSG1L2A8MUP6 293 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 CDC25BP30305 580 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 PPP2R5EQ16537 467 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 BBS9Q3SYG4 887 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 ZNF667Q5HYK9 610 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 BCAS4Q8TDM0 211 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 NPHP3-ACAD11A0A0J9YXS1 232 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 CLNS1AP54105 237 aaKnown RBP13.89□□□□□ -0.19
PTPRK-207ENST00000368226 PSMD2Q13200 908 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 TSNAXIP1Q2TAA8 658 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 TMEM270Q6UE05 265 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 VSTM4Q8IW00 320 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 MICALL2Q8IY33 904 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 PDCD6IPQ8WUM4 868 aaKnown RBP13.89□□□□□ -0.19
PTPRK-207ENST00000368226 RAD54LQ92698 747 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 SH3GLB2Q9NR46 395 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 MSH2P43246 934 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 ASPHQ12797 758 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 IQCB1Q15051 598 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 ARMCX2Q7L311 632 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 CFAP61Q8NHU2 1237 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 GCNAQ96QF7 691 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 TSR3Q9UJK0 312 aaKnown RBP13.89□□□□□ -0.19
PTPRK-207ENST00000368226 MYO3BQ8WXR4 1341 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 GPC4O75487 556 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 TOM1L1O75674 476 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 NDUFA10O95299 355 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 COASYQ13057 564 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 ENOX1Q8TC92 643 aaKnown RBP13.89□□□□□ -0.19
PTPRK-207ENST00000368226 NSUN6Q8TEA1 469 aaKnown RBP13.89□□□□□ -0.19
PTPRK-207ENST00000368226 TCP11Q8WWU5 503 aa13.89□□□□□ -0.19
PTPRK-207ENST00000368226 OVOS2A0A0G2JMS6 1433 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 OVOS2A0A0J9YW53 1432 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 OVOS2Q6IE36 1432 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 ALKQ9UM73 1620 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 PIK3R2O00459 728 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 MAPK6Q16659 721 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 ZNF699Q32M78 642 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 LMBRD2Q68DH5 695 aaPredicted RBP13.88□□□□□ -0.19
PTPRK-207ENST00000368226 DEPDC1BQ8WUY9 529 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 POLR3FQ9H1D9 316 aaPredicted RBP13.88□□□□□ -0.19
PTPRK-207ENST00000368226 NCAPD2Q15021 1401 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 WDR64B1ANS9 1081 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 SERPINB6P35237 376 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 GINM1Q9NU53 330 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 TET3O43151 1660 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 NR3C1P04150 777 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 GUCY1A2P33402 732 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 SOX5P35711 763 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 DHX9Q08211 1270 aaKnown RBP13.88□□□□□ -0.19
PTPRK-207ENST00000368226 ZNF746Q6NUN9 644 aaPredicted RBP13.88□□□□□ -0.19
PTPRK-207ENST00000368226 OLA1Q9NTK5 396 aaKnown RBP13.88□□□□□ -0.19
PTPRK-207ENST00000368226 LMCD1Q9NZU5 365 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 GOLGA8MH3BSY2 632 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 SRGAP2O75044 1071 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 ARHGAP31Q2M1Z3 1444 aa13.88□□□□□ -0.19
PTPRK-207ENST00000368226 PRCPP42785 496 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 LMNB2Q03252 620 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 GFPT1Q06210 699 aaPredicted RBP13.87□□□□□ -0.19
PTPRK-207ENST00000368226 GRM4Q14833 912 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 TOGARAM2Q6ZUX3 1019 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 MB21D2Q8IYB1 491 aaPredicted RBP13.87□□□□□ -0.19
PTPRK-207ENST00000368226 ISCA1Q9BUE6 129 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 INTS9Q9NV88 658 aaKnown RBP13.87□□□□□ -0.19
PTPRK-207ENST00000368226 CRB1P82279 1406 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 ZBED1O96006 694 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 ADORA2BP29275 332 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 ZBED6P86452 979 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 MUM1Q2TAK8 710 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 SPOPLQ6IQ16 392 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 APOBEC3FQ8IUX4 373 aaKnown RBP13.87□□□□□ -0.19
PTPRK-207ENST00000368226 NCAPGQ9BPX3 1015 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 LXNQ9BS40 222 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 CREB3O43889 395 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 GPC3P51654 580 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 ZSCAN26Q16670 478 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 ARL6IP4Q66PJ3 421 aaKnown RBP13.87□□□□□ -0.19
PTPRK-207ENST00000368226 SPDYE1Q8NFV5 336 aaPredicted RBP13.87□□□□□ -0.19
PTPRK-207ENST00000368226 CDHR2Q9BYE9 1310 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 ADCY10Q96PN6 1610 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 CPSF1Q10570 1443 aaKnown RBP13.87□□□□□ -0.19
PTPRK-207ENST00000368226 CACNB2Q08289 660 aaPredicted RBP13.87□□□□□ -0.19
PTPRK-207ENST00000368226 SLFN12LQ6IEE8 588 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 UNC13DQ70J99 1090 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 CEP120Q8N960 986 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 LINC00116Q8NCU8 138 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 NRKQ7Z2Y5 1582 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 KRT3P12035 628 aa13.87□□□□□ -0.19
PTPRK-207ENST00000368226 RAB44Q7Z6P3 723 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms