RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ZHX2Q9Y6X8 837 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 A0A0U1RQJ8 604 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 GTPBP10A4D1E9 387 aaKnown RBP15.4■□□□□ 0.06
USF1-202ENST00000368020 RBAK-RBAKDNI3L0D1 243 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 TOMM70O94826 608 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 CELF2O95319 508 aaKnown RBP15.4■□□□□ 0.06
USF1-202ENST00000368020 AFPP02771 609 aaKnown RBP15.4■□□□□ 0.06
USF1-202ENST00000368020 GUCY2CP25092 1073 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 MCM3P25205 808 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 ZNF131P52739 623 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 BACE1P56817 501 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 KCNMA1Q12791 1236 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 B3GNT9Q6UX72 402 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 ATRIPQ8WXE1 791 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 DYDC2Q96IM9 177 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 UIMC1Q96RL1 719 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 RUSC1Q9BVN2 902 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 FGFBP2Q9BYJ0 223 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 SLC38A10Q9HBR0 1119 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 ARFGAP3Q9NP61 516 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 RGL1Q9NZL6 768 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.4■□□□□ 0.06
USF1-202ENST00000368020 FBXL5Q9UKA1 691 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 AFG3L2Q9Y4W6 797 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 PCDHA13Q9Y5I0 950 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 SAR1BQ9Y6B6 198 aa15.4■□□□□ 0.06
USF1-202ENST00000368020 PARP14Q460N5 1801 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 PASKQ96RG2 1323 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 SPDYE5A6NIY4 337 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 PJA2O43164 708 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 ERLIN1O75477 346 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 NR3C1P04150 777 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 YY1P25490 414 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 EIF4A3P38919 411 aaKnown RBP15.39■□□□□ 0.05
USF1-202ENST00000368020 KCNH2Q12809 1159 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 SPP2Q13103 211 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 XRRA1Q6P2D8 792 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 MOB2Q70IA6 237 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 HS2ST1Q7LGA3 356 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 SMAP1Q8IYB5 467 aaPredicted RBP15.39■□□□□ 0.05
USF1-202ENST00000368020 RNF10Q8N5U6 811 aaKnown RBP15.39■□□□□ 0.05
USF1-202ENST00000368020 TBC1D5Q92609 795 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 TIPINQ9BVW5 301 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 LSM14BQ9BX40 385 aaKnown RBP15.39■□□□□ 0.05
USF1-202ENST00000368020 GBP3Q9H0R5 595 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 ZNF408Q9H9D4 720 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 TBC1D22BQ9NU19 505 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 FBXO28Q9NVF7 368 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 JRKLQ9Y4A0 524 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 PCDHB13Q9Y5F0 798 aa15.39■□□□□ 0.05
USF1-202ENST00000368020 ZNF536O15090 1300 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 EPHB6O15197 1021 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 ZBED4O75132 1171 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 CASP5P51878 434 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 CTTNQ14247 550 aaKnown RBP15.38■□□□□ 0.05
USF1-202ENST00000368020 MYBPC2Q14324 1141 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 C10orf76Q5T2E6 689 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 CST9Q5W186 159 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 MYCT1Q8N699 235 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 CCDC155Q8N6L0 562 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 MSANTD4Q8NCY6 345 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 HNRNPLLQ8WVV9 542 aaKnown RBP15.38■□□□□ 0.05
USF1-202ENST00000368020 C12orf42Q96LP6 360 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 UNC45AQ9H3U1 944 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 FAM53CQ9NYF3 392 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 AIPL1Q9NZN9 384 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 TCEAL9Q9UHQ7 104 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 TSKSQ9UJT2 592 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 PPP1R9AQ9ULJ8 1098 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 ATP8B3O60423 1300 aa15.38■□□□□ 0.05
USF1-202ENST00000368020 ARHGEF35A5YM69 484 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 CXCL11O14625 94 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 CHMP2AO43633 222 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 ZRANB2O95218 330 aaKnown RBP eCLIP15.37■□□□□ 0.05
USF1-202ENST00000368020 P4HBP07237 508 aaKnown RBP15.37■□□□□ 0.05
USF1-202ENST00000368020 MAPTP10636 758 aaKnown RBP15.37■□□□□ 0.05
USF1-202ENST00000368020 PRLRP16471 622 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 TAL1P17542 331 aaPredicted RBP15.37■□□□□ 0.05
USF1-202ENST00000368020 TDRD12Q587J7 1177 aaKnown RBP15.37■□□□□ 0.05
USF1-202ENST00000368020 SH3D19Q5HYK7 790 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 MIER3Q7Z3K6 550 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 SLC17A8Q8NDX2 589 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 SMCR8Q8TEV9 937 aaPredicted RBP15.37■□□□□ 0.05
USF1-202ENST00000368020 CLEC4DQ8WXI8 215 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 AGBL1Q96MI9 1066 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 LXNQ9BS40 222 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 ZSWIM4Q9H7M6 989 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 DBR1Q9UK59 544 aaKnown RBP15.37■□□□□ 0.05
USF1-202ENST00000368020 ASTN1O14525 1302 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 NKRFO15226 690 aaKnown RBP eCLIP15.37■□□□□ 0.05
USF1-202ENST00000368020 FLOT1O75955 427 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 NOL4O94818 638 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 PRPF6O94906 941 aaKnown RBP15.37■□□□□ 0.05
USF1-202ENST00000368020 LYPLA2O95372 231 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 MYBP10242 640 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 PSMC2P35998 433 aaKnown RBP15.37■□□□□ 0.05
USF1-202ENST00000368020 POLR2FP61218 127 aaKnown RBP15.37■□□□□ 0.05
USF1-202ENST00000368020 FAM193AP78312 1265 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 PPIL2Q13356 520 aa15.37■□□□□ 0.05
USF1-202ENST00000368020 MTMR2Q13614 643 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms