RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 KRT80Q6KB66 452 aa16.83■□□□□ 0.29
NUCKS1-201ENST00000367142 TRMT10CQ7L0Y3 403 aaKnown RBP16.83■□□□□ 0.29
NUCKS1-201ENST00000367142 MAP4K1Q92918 833 aa16.83■□□□□ 0.29
NUCKS1-201ENST00000367142 ENC1O14682 589 aa16.83■□□□□ 0.29
NUCKS1-201ENST00000367142 CLDN3O15551 220 aa16.83■□□□□ 0.29
NUCKS1-201ENST00000367142 GSPT1P15170 499 aaKnown RBP16.83■□□□□ 0.29
NUCKS1-201ENST00000367142 EXOC4Q96A65 974 aa16.83■□□□□ 0.29
NUCKS1-201ENST00000367142 TPX2Q9ULW0 747 aaKnown RBP16.83■□□□□ 0.29
NUCKS1-201ENST00000367142 KCNH4Q9UQ05 1017 aa16.83■□□□□ 0.29
NUCKS1-201ENST00000367142 KIFC3Q9BVG8 833 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 LSG1Q9H089 658 aaKnown RBP16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 SH3GLB2Q9NR46 395 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 BSDC1Q9NW68 430 aaPredicted RBP16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 PRKAB2O43741 272 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 OCM2P0CE71 109 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 OCMP0CE72 109 aaPredicted RBP16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 KCNA4P22459 653 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 CCNE1P24864 410 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 SNAP25P60880 206 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 DR1Q01658 176 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 FOXD4Q12950 439 aaPredicted RBP16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 ZNF699Q32M78 642 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 PPP2R3CQ969Q6 453 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 SUDS3Q9H7L9 328 aaPredicted RBP16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 USP17L5A8MUK1 530 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 CREB3O43889 395 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 MMP10P09238 476 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 PLCG1P19174 1290 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 HABP4Q5JVS0 413 aaKnown RBP16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 RAB42Q8N4Z0 105 aa16.83■□□□□ 0.28
NUCKS1-201ENST00000367142 FTCDO95954 541 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 RAD51Q06609 339 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 DHX9Q08211 1270 aaKnown RBP16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 ZNF568Q3ZCX4 644 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 PPP6R3Q5H9R7 873 aaPredicted RBP16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 MMP19Q99542 508 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 C2orf40Q9H1Z8 148 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 MAN1B1Q9UKM7 699 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 IKBKBO14920 756 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 LRRC63Q05C16 580 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 CAPRIN1Q14444 709 aaKnown RBP16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 RHOT2Q8IXI1 618 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 FBXO41Q8TF61 875 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 ULK4Q96C45 1275 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 ASIC4Q96FT7 647 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 STRIP2Q9ULQ0 834 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 ACCSLQ4AC99 568 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 NLRP10Q86W26 655 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 SMYD4Q8IYR2 804 aaPredicted RBP16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 TRAIPQ9BWF2 469 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 TBK1Q9UHD2 729 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 ZHX2Q9Y6X8 837 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 NPHP4O75161 1426 aaPredicted RBP16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 PRELPP51888 382 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 CC2D1AQ6P1N0 951 aaPredicted RBP16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 LCA5Q86VQ0 697 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 TRIM4Q9C037 500 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 ZNF302Q9NR11 478 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 ANGPTL2Q9UKU9 493 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 RPAP1Q9BWH6 1393 aaPredicted RBP16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 CRKP46108 304 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 VEPH1Q14D04 833 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 RBM41Q96IZ5 413 aaKnown RBP16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 TMEM106CQ9BVX2 250 aa16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 NHEJ1Q9H9Q4 299 aaPredicted RBP16.82■□□□□ 0.28
NUCKS1-201ENST00000367142 E5RI56 91 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 TRPA1O75762 1119 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 GH2P01242 217 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 MAP2K2P36507 400 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 SNRNP48Q6IEG0 339 aaKnown RBP16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 SH3TC2Q8TF17 1288 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 PPP1R13BQ96KQ4 1090 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 NR1H4Q96RI1 486 aaPredicted RBP16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 WRNIP1Q96S55 665 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 ANLNQ9NQW6 1124 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 TBC1D22BQ9NU19 505 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 DIS3Q9Y2L1 958 aaKnown RBP16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 KRT37O76014 449 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 COPB2P35606 906 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 C2orf54Q08AI8 447 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 FAM182BQ5T319 152 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 ZNF467Q7Z7K2 595 aaPredicted RBP16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 GCKP35557 465 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 TFDP2Q14188 446 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 FAM83BQ5T0W9 1011 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 LRRC37BQ96QE4 947 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 CCDC151A5D8V7 595 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 MAML1Q92585 1016 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 RABGGTAQ92696 567 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 RMDN3Q96TC7 470 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 STAP1Q9ULZ2 295 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 L3MBTL1Q9Y468 752 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 EFCAB14O75071 495 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 DDX5P17844 614 aaKnown RBP16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 EIF4A3P38919 411 aaKnown RBP16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 LBRQ14739 615 aaKnown RBP16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 DCAF4L1Q3SXM0 396 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 TTC13Q8NBP0 860 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 NSUN6Q8TEA1 469 aaKnown RBP16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 PBXIP1Q96AQ6 731 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms