RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 CDC6Q99741 560 aa9.69□□□□□ -0.86
YBX3-204ENST00000366290 ZNF541Q9H0D2 1346 aa9.69□□□□□ -0.86
YBX3-204ENST00000366290 PITPNM2Q9BZ72 1349 aa9.68□□□□□ -0.86
YBX3-204ENST00000366290 BCAR3O75815 825 aa9.68□□□□□ -0.86
YBX3-204ENST00000366290 FGFR1P11362 822 aa9.68□□□□□ -0.86
YBX3-204ENST00000366290 CTSWP56202 376 aa9.68□□□□□ -0.86
YBX3-204ENST00000366290 POU4F1Q01851 419 aa9.68□□□□□ -0.86
YBX3-204ENST00000366290 DPY19L1Q2PZI1 675 aa9.68□□□□□ -0.86
YBX3-204ENST00000366290 GAB4Q2WGN9 574 aa9.68□□□□□ -0.86
YBX3-204ENST00000366290 DPP8Q6V1X1 898 aaPredicted RBP9.68□□□□□ -0.86
YBX3-204ENST00000366290 EXOC2Q96KP1 924 aa9.68□□□□□ -0.86
YBX3-204ENST00000366290 TAF1DQ9H5J8 278 aaPredicted RBP9.68□□□□□ -0.86
YBX3-204ENST00000366290 SMC4Q9NTJ3 1288 aa9.68□□□□□ -0.86
YBX3-204ENST00000366290 GPR55Q9Y2T6 319 aaPredicted RBP9.68□□□□□ -0.86
YBX3-204ENST00000366290 ADAMTSL1Q8N6G6 1762 aa9.68□□□□□ -0.86
YBX3-204ENST00000366290 PTPRCP08575 1304 aa9.67□□□□□ -0.86
YBX3-204ENST00000366290 PPIP5K2O43314 1243 aa9.67□□□□□ -0.86
YBX3-204ENST00000366290 ALDH1L1O75891 902 aa9.67□□□□□ -0.86
YBX3-204ENST00000366290 CSF1RP07333 972 aa9.67□□□□□ -0.86
YBX3-204ENST00000366290 BMP8BP34820 402 aa9.67□□□□□ -0.86
YBX3-204ENST00000366290 PLEKHG4Q58EX7 1191 aa9.67□□□□□ -0.86
YBX3-204ENST00000366290 FAM209AQ5JX71 171 aa9.67□□□□□ -0.86
YBX3-204ENST00000366290 C16orf86Q6ZW13 317 aa9.67□□□□□ -0.86
YBX3-204ENST00000366290 UBE3BQ7Z3V4 1068 aa9.67□□□□□ -0.86
YBX3-204ENST00000366290 IER2Q9BTL4 223 aa9.67□□□□□ -0.86
YBX3-204ENST00000366290 NKX2-4Q9H2Z4 354 aa9.67□□□□□ -0.86
YBX3-204ENST00000366290 UTYO14607 1347 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 TRBV23-1A0A0A0MS06 115 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 PRODHO43272 600 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 ADAMTS4O75173 837 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 CD3EP07766 207 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 PABPC1P11940 636 aaKnown RBP9.66□□□□□ -0.86
YBX3-204ENST00000366290 L1CAMP32004 1257 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 AOC3Q16853 763 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 NSMFQ6X4W1 530 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 SCUBE1Q8IWY4 988 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 NIM1KQ8IY84 436 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 OSBP2Q969R2 916 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 IPO9Q96P70 1041 aaKnown RBP9.66□□□□□ -0.86
YBX3-204ENST00000366290 CDC5LQ99459 802 aaKnown RBP9.66□□□□□ -0.86
YBX3-204ENST00000366290 GREM2Q9H772 168 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 ATP13A1Q9HD20 1204 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 BSDC1Q9NW68 430 aaPredicted RBP9.66□□□□□ -0.86
YBX3-204ENST00000366290 POLLQ9UGP5 575 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 DUSP13Q9UII6 198 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 RCAN3Q9UKA8 241 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 TNNQ9UQP3 1299 aa9.66□□□□□ -0.86
YBX3-204ENST00000366290 CNTNAP1P78357 1384 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 GRM8O00222 908 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 FOXN1O15353 648 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 CLSTN1O94985 981 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 SYPP08247 313 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 HOXC12P31275 282 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 GRIK1P39086 918 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 GFRA1P56159 465 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 PCBP3P57721 371 aaKnown RBP9.65□□□□□ -0.86
YBX3-204ENST00000366290 GPSM2P81274 684 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 FOXO4P98177 505 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 SF1Q15637 639 aaKnown RBP9.65□□□□□ -0.86
YBX3-204ENST00000366290 MSMPQ1L6U9 139 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 TMPRSS7Q7RTY8 843 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 LDHDQ86WU2 507 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 DTX1Q86Y01 620 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 ANKRD18AQ8IVF6 992 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 TBC1D16Q8TBP0 767 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 KISS1RQ969F8 398 aaPredicted RBP9.65□□□□□ -0.86
YBX3-204ENST00000366290 HRASLS5Q96KN8 279 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 MCMBPQ9BTE3 642 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 DHRS4Q9BTZ2 278 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 CYP26B1Q9NR63 512 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 HACL1Q9UJ83 578 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 NOB1Q9ULX3 412 aaKnown RBP9.65□□□□□ -0.86
YBX3-204ENST00000366290 MRPS23Q9Y3D9 190 aaKnown RBP9.65□□□□□ -0.86
YBX3-204ENST00000366290 PSME4Q14997 1843 aa9.65□□□□□ -0.86
YBX3-204ENST00000366290 SCN9AQ15858 1988 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 XDHP47989 1333 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 SPEF2Q9C093 1822 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 CCDC163A0A0D9SF12 145 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 STXBP3O00186 592 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 ASMTLO95671 621 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 SNRPB2P08579 225 aaKnown RBP9.64□□□□□ -0.87
YBX3-204ENST00000366290 VAV1P15498 845 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 CXCL9Q07325 125 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 ZNF662Q6ZS27 426 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 KIAA0907Q7Z7F0 614 aaPredicted RBP9.64□□□□□ -0.87
YBX3-204ENST00000366290 PNMA8AQ86V59 439 aaPredicted RBP9.64□□□□□ -0.87
YBX3-204ENST00000366290 CCDC140Q96MF4 163 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 SLC12A9Q9BXP2 914 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 FOXP3Q9BZS1 431 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 TCFL5Q9UL49 500 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 ZNF609O15014 1411 aa9.64□□□□□ -0.87
YBX3-204ENST00000366290 KIF16BQ96L93 1317 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 YDJCA8MPS7 323 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 DLX3O60479 287 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 ZNF205O95201 554 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 TRIM27P14373 513 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 IFNGR1P15260 489 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 EPHX2P34913 555 aa9.63□□□□□ -0.87
YBX3-204ENST00000366290 NOP2P46087 812 aaKnown RBP9.63□□□□□ -0.87
YBX3-204ENST00000366290 KCNJ6P48051 423 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms