RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PICK1Q9NRD5 415 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 SLC5A4Q9NY91 659 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 ZMYND8Q9ULU4 1186 aaPredicted RBP13.77□□□□□ -0.21
VAMP1-201ENST00000361716 CORO1CQ9ULV4 474 aaPredicted RBP13.77□□□□□ -0.21
VAMP1-201ENST00000361716 TNFRSF8P28908 595 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 PLS1Q14651 629 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 MAN2A1Q16706 1144 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 INTS8Q75QN2 995 aaKnown RBP13.77□□□□□ -0.21
VAMP1-201ENST00000361716 P3H4Q92791 437 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 RPS6KC1Q96S38 1066 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 C6orf50Q9HD87 102 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 INTUQ9ULD6 942 aa13.77□□□□□ -0.21
VAMP1-201ENST00000361716 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.77□□□□□ -0.21
VAMP1-201ENST00000361716 UBE2SQ16763 222 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 AGBL2Q5U5Z8 902 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 METTL13Q8N6R0 699 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 INPP4AQ96PE3 977 aaPredicted RBP13.76□□□□□ -0.21
VAMP1-201ENST00000361716 ERGIC2Q96RQ1 377 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 SEMA6BQ9H3T3 888 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 DDAH1O94760 285 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 ACSL3O95573 720 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 FGFR1OPO95684 399 aaKnown RBP13.76□□□□□ -0.21
VAMP1-201ENST00000361716 TUBP50607 506 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 PPP2R5BQ15173 497 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 NEK9Q8TD19 979 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 ANKS1AQ92625 1134 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 L3MBTL3Q96JM7 780 aaPredicted RBP13.76□□□□□ -0.21
VAMP1-201ENST00000361716 PCDHA6Q9UN73 950 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 PCDHA8Q9Y5H6 950 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 SPATA31A1Q5TZJ5 1347 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 NPHP3-ACAD11A0A0J9YXS1 232 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 H0YGN5 161 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 TDP2O95551 362 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 ACTN1P12814 892 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 FGFR2P21802 821 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 CNGA1P29973 690 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 CRKLP46109 303 aaKnown RBP13.76□□□□□ -0.21
VAMP1-201ENST00000361716 COPS2P61201 443 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 TNIP1Q15025 636 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 MEI1Q5TIA1 1274 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 NUDCD1Q96RS6 583 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 NFS1Q9Y697 457 aa13.76□□□□□ -0.21
VAMP1-201ENST00000361716 C5P01031 1676 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 KLRC4O43908 158 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 RHOBTB3O94955 611 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 ICA1Q05084 483 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 BLMHQ13867 455 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 NAB2Q15742 525 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 LRRC23Q53EV4 343 aaPredicted RBP13.75□□□□□ -0.21
VAMP1-201ENST00000361716 CRELD2Q6UXH1 353 aaPredicted RBP13.75□□□□□ -0.21
VAMP1-201ENST00000361716 SEPT14Q6ZU15 432 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 C3orf67Q6ZVT6 689 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 CNBD1Q8NA66 436 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 USP15Q9Y4E8 981 aaPredicted RBP13.75□□□□□ -0.21
VAMP1-201ENST00000361716 MRC1P22897 1456 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 MYH6P13533 1939 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 CCDC169A6NNP5 214 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 SLC16A2P36021 539 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 PMS2P54278 862 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 PPP1R15BQ5SWA1 713 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 ZNF662Q6ZS27 426 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 RFX8Q6ZV50 586 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 SLC51AQ86UW1 340 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 REXO1Q8N1G1 1221 aaKnown RBP13.75□□□□□ -0.21
VAMP1-201ENST00000361716 U2AF1L4Q8WU68 220 aaKnown RBP13.75□□□□□ -0.21
VAMP1-201ENST00000361716 ARHGEF2Q92974 986 aaKnown RBP13.75□□□□□ -0.21
VAMP1-201ENST00000361716 PLA2G12BQ9BX93 195 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 TRIM7Q9C029 511 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 HOMER3Q9NSC5 361 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 ADAM22Q9P0K1 906 aa13.75□□□□□ -0.21
VAMP1-201ENST00000361716 NKX1-2Q9UD57 310 aaPredicted RBP13.75□□□□□ -0.21
VAMP1-201ENST00000361716 MEIS1O00470 390 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 MAP3K13O43283 966 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 SERPING1P05155 500 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 RARAP10276 462 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 PDE6CP51160 858 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 FUT2Q10981 343 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 NPY5RQ15761 445 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 IFI16Q16666 785 aaKnown RBP13.74□□□□□ -0.21
VAMP1-201ENST00000361716 LONRF1Q17RB8 773 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 NEK8Q86SG6 692 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 RDH13Q8NBN7 331 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 FAM84BQ96KN1 310 aaPredicted RBP13.74□□□□□ -0.21
VAMP1-201ENST00000361716 ADAM33Q9BZ11 813 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 METTL5Q9NRN9 209 aaKnown RBP13.74□□□□□ -0.21
VAMP1-201ENST00000361716 DAAM1Q9Y4D1 1078 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 MYMKA6NI61 221 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 GRIPAP1Q4V328 841 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 UBAP2Q5T6F2 1119 aaKnown RBP13.74□□□□□ -0.21
VAMP1-201ENST00000361716 RASIP1Q5U651 963 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 NBPF5PQ86XG9 351 aaPredicted RBP13.74□□□□□ -0.21
VAMP1-201ENST00000361716 SPIRE2Q8WWL2 714 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 LARP4BQ92615 738 aaKnown RBP13.74□□□□□ -0.21
VAMP1-201ENST00000361716 DDX12PQ92771 950 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 RIOK1Q9BRS2 568 aaKnown RBP13.74□□□□□ -0.21
VAMP1-201ENST00000361716 KLHL14Q9P2G3 628 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 PCDHB13Q9Y5F0 798 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 PCDHGC5Q9Y5F6 944 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 LTBP4Q8N2S1 1624 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 TARSP26639 723 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms