RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 LGALS16A8MUM7 142 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 TBXAS1P24557 533 aaPredicted RBP14.54□□□□□ -0.08
LDB3-202ENST00000361373 ERICH1Q86X53 443 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 THNSL1Q8IYQ7 743 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 BEST2Q8NFU1 509 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 GCNAQ96QF7 691 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 TTC1Q99614 292 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 ANAPC5Q9UJX4 755 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 KIDINS220Q9ULH0 1771 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 PDS5AQ29RF7 1337 aaKnown RBP14.54□□□□□ -0.08
LDB3-202ENST00000361373 SYNJ2BP-COX16A0A087WUM0 186 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 A0A0G2JLW4 131 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 RGL2O15211 777 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 EFNA5P52803 228 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 OSTNP61366 133 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 TTBK2Q6IQ55 1244 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 COX16Q9P0S2 106 aa14.54□□□□□ -0.08
LDB3-202ENST00000361373 REREQ9P2R6 1566 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 ECEL1O95672 775 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 KRT1P04264 644 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 C16orf86Q6ZW13 317 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 ZMYND15Q9H091 742 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 CPVLQ9H3G5 476 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 ZNF70Q9UC06 446 aaPredicted RBP14.53□□□□□ -0.08
LDB3-202ENST00000361373 SGK1O00141 431 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 NFKBIAP25963 317 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 ENOSF1Q7L5Y1 443 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 FMR1NBQ8N0W7 255 aaPredicted RBP14.53□□□□□ -0.08
LDB3-202ENST00000361373 GABBR1Q9UBS5 961 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 TACC3Q9Y6A5 838 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 ATP8B1O43520 1251 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 COBLO75128 1261 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 GUCY2DQ02846 1103 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 COASYQ13057 564 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 OXER1Q8TDS5 423 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 MRPL4Q9BYD3 311 aaKnown RBP14.53□□□□□ -0.08
LDB3-202ENST00000361373 MAD1L1Q9Y6D9 718 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 SPDYE16A6NNV3 312 aaPredicted RBP14.53□□□□□ -0.08
LDB3-202ENST00000361373 SLC15A2Q16348 729 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 ZNF568Q3ZCX4 644 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 SPDYE2Q495Y8 402 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 ZNF280CQ8ND82 737 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 BANK1Q8NDB2 785 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 GCOM2Q9BZD3 368 aaPredicted RBP14.53□□□□□ -0.08
LDB3-202ENST00000361373 RRAGDQ9NQL2 400 aaPredicted RBP14.53□□□□□ -0.08
LDB3-202ENST00000361373 HACL1Q9UJ83 578 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 GDAQ9Y2T3 454 aa14.53□□□□□ -0.08
LDB3-202ENST00000361373 MIF4GDA9UHW6 222 aaKnown RBP14.52□□□□□ -0.08
LDB3-202ENST00000361373 CD58P19256 250 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 RPS6KA2Q15349 733 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 SWSAP1Q6NVH7 229 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 EP400NLQ6ZTU2 488 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 CACNA2D3Q8IZS8 1091 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 GOLGA8IPA6NC78 632 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 GOLGA8JA6NMD2 632 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 ZNF131P52739 623 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 HMGCS2P54868 508 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 CDC42EP5Q6NZY7 148 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 CACYBPQ9HB71 228 aaKnown RBP14.52□□□□□ -0.08
LDB3-202ENST00000361373 STRIP2Q9ULQ0 834 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 PCDHA13Q9Y5I0 950 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 DIP2BQ9P265 1576 aa14.52□□□□□ -0.08
LDB3-202ENST00000361373 DENND3A2RUS2 1198 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 E9PMD0 336 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 F8W8V4 182 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 EYA4O95677 639 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 INHBAP08476 426 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 OAS2P29728 719 aaKnown RBP14.52□□□□□ -0.09
LDB3-202ENST00000361373 YWHAGP61981 247 aaKnown RBP eCLIP14.52□□□□□ -0.09
LDB3-202ENST00000361373 SLC10A5Q5PT55 438 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 OR6B3Q8NGW1 331 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 CCSER1Q9C0I3 900 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 GPR75-ASB3A0A0A6YYF3 556 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 HUS1O60921 280 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 MFAP3LO75121 409 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 PPP4CP60510 307 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 XRRA1Q6P2D8 792 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 UBE2Q2Q8WVN8 375 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.52□□□□□ -0.09
LDB3-202ENST00000361373 LXNQ9BS40 222 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 VCPKMTQ9H867 229 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 KLHL14Q9P2G3 628 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 SLC9A2Q9UBY0 812 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 SLC8A2Q9UPR5 921 aa14.52□□□□□ -0.09
LDB3-202ENST00000361373 SPATA31D1Q6ZQQ2 1576 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 POTEB3A0JP26 581 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 POTECB2RU33 542 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 EPHB4P54760 987 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 KCNB1Q14721 858 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 TWF2Q6IBS0 349 aaKnown RBP14.51□□□□□ -0.09
LDB3-202ENST00000361373 ZNF449Q6P9G9 518 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 POTEBQ6S5H4 581 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 ADAT2Q7Z6V5 191 aaKnown RBP14.51□□□□□ -0.09
LDB3-202ENST00000361373 SPATA33Q96N06 139 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 TMEM260Q9NX78 707 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 DNAJC12Q9UKB3 198 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 NDUFB10O96000 172 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 PDIA6Q15084 440 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 SPATS2Q86XZ4 545 aaKnown RBP14.51□□□□□ -0.09
LDB3-202ENST00000361373 KCTD6Q8NC69 237 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms