RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 TRIM9Q9C026 710 aa15.04■□□□□ -0
CTR9-201ENST00000361367 PLEKHA4Q9H4M7 779 aa15.04■□□□□ -0
CTR9-201ENST00000361367 GOLGA8SH3BPF8 625 aa15.04■□□□□ -0
CTR9-201ENST00000361367 GCLMP48507 274 aa15.04■□□□□ -0
CTR9-201ENST00000361367 RPS6P62753 249 aaKnown RBP15.04■□□□□ -0
CTR9-201ENST00000361367 SH2D3AQ9BRG2 576 aa15.04■□□□□ -0
CTR9-201ENST00000361367 ZFYVE28Q9HCC9 887 aa15.04■□□□□ -0
CTR9-201ENST00000361367 HIP1RO75146 1068 aa15.03■□□□□ -0
CTR9-201ENST00000361367 ZNF667Q5HYK9 610 aa15.03■□□□□ -0
CTR9-201ENST00000361367 EP400NLQ6ZTU2 488 aa15.03■□□□□ -0
CTR9-201ENST00000361367 MRRFQ96E11 262 aaKnown RBP15.03■□□□□ -0
CTR9-201ENST00000361367 NSRP1Q9H0G5 558 aaKnown RBP15.03■□□□□ -0
CTR9-201ENST00000361367 VPS33BQ9H267 617 aa15.03■□□□□ -0
CTR9-201ENST00000361367 PFASO15067 1338 aa15.03■□□□□ -0
CTR9-201ENST00000361367 BACE1P56817 501 aa15.03■□□□□ -0
CTR9-201ENST00000361367 XKR3Q5GH77 459 aa15.03■□□□□ -0
CTR9-201ENST00000361367 HAUS6Q7Z4H7 955 aa15.03■□□□□ -0
CTR9-201ENST00000361367 RAET1EQ8TD07 263 aa15.03■□□□□ -0
CTR9-201ENST00000361367 RSAD2Q8WXG1 361 aa15.03■□□□□ -0
CTR9-201ENST00000361367 SEPT1Q8WYJ6 367 aa15.03■□□□□ -0
CTR9-201ENST00000361367 RAB17Q9H0T7 212 aa15.03■□□□□ -0
CTR9-201ENST00000361367 LGALS16A8MUM7 142 aa15.03■□□□□ -0
CTR9-201ENST00000361367 TNFAIP2Q03169 654 aa15.03■□□□□ -0
CTR9-201ENST00000361367 SEC23AQ15436 765 aa15.03■□□□□ -0
CTR9-201ENST00000361367 PPP2R5EQ16537 467 aa15.03■□□□□ -0
CTR9-201ENST00000361367 ADAT2Q7Z6V5 191 aaKnown RBP15.03■□□□□ -0
CTR9-201ENST00000361367 FAM163AQ96GL9 167 aaPredicted RBP15.03■□□□□ -0
CTR9-201ENST00000361367 FMN2Q9NZ56 1722 aa15.02■□□□□ -0
CTR9-201ENST00000361367 WNT10BO00744 389 aa15.02■□□□□ -0
CTR9-201ENST00000361367 MED7O43513 233 aa15.02■□□□□ -0
CTR9-201ENST00000361367 CYP2B6P20813 491 aa15.02■□□□□ -0
CTR9-201ENST00000361367 SEMA3FQ13275 785 aa15.02■□□□□ -0
CTR9-201ENST00000361367 PPP2R5DQ14738 602 aa15.02■□□□□ -0
CTR9-201ENST00000361367 SPDYE2Q495Y8 402 aa15.02■□□□□ -0
CTR9-201ENST00000361367 KCNQ5Q9NR82 932 aa15.02■□□□□ -0
CTR9-201ENST00000361367 TMX2Q9Y320 296 aa15.02■□□□□ -0
CTR9-201ENST00000361367 SERPING1P05155 500 aa15.02■□□□□ -0
CTR9-201ENST00000361367 IVLP07476 585 aa15.02■□□□□ -0
CTR9-201ENST00000361367 METTL16Q86W50 562 aaKnown RBP15.02■□□□□ -0
CTR9-201ENST00000361367 CCDC170Q8IYT3 715 aa15.02■□□□□ -0
CTR9-201ENST00000361367 OR6J1Q8NGC5 347 aa15.02■□□□□ -0
CTR9-201ENST00000361367 PRDM10Q9NQV6 1147 aa15.02■□□□□ -0
CTR9-201ENST00000361367 DYNC1LI2O43237 492 aaPredicted RBP15.02□□□□□ -0.01
CTR9-201ENST00000361367 STAMBPO95630 424 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 KCNH2Q12809 1159 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 CASC4Q6P4E1 433 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 USP49Q70CQ1 688 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 TMEM60Q9H2L4 133 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 HAUS2Q9NVX0 235 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 ICAM1P05362 532 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 MAPK4P31152 587 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 PPP1R2P3Q6NXS1 205 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 DSTYKQ6XUX3 929 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 MAP7D3Q8IWC1 876 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 MXRA8Q9BRK3 442 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 LRRC4Q9HBW1 653 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 VPS18Q9P253 973 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 ADAMTS1Q9UHI8 967 aa15.02□□□□□ -0.01
CTR9-201ENST00000361367 SOWAHDA6NJG2 315 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 VEGFAP15692 232 aaPredicted RBP15.01□□□□□ -0.01
CTR9-201ENST00000361367 VPS41P49754 854 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 CYP27A1Q02318 531 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 BFSP1Q12934 665 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 MRPL4Q9BYD3 311 aaKnown RBP15.01□□□□□ -0.01
CTR9-201ENST00000361367 NHEJ1Q9H9Q4 299 aaPredicted RBP15.01□□□□□ -0.01
CTR9-201ENST00000361367 SPTLC3Q9NUV7 552 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 DDX41Q9UJV9 622 aaKnown RBP15.01□□□□□ -0.01
CTR9-201ENST00000361367 DGAT1O75907 488 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 KCNB1Q14721 858 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 BSPRYQ5W0U4 402 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 APOBEC3HQ6NTF7 200 aaKnown RBP15.01□□□□□ -0.01
CTR9-201ENST00000361367 PDZD4Q76G19 769 aaPredicted RBP15.01□□□□□ -0.01
CTR9-201ENST00000361367 SLC35F6Q8N357 371 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 ACRBPQ8NEB7 543 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 PPP1R13BQ96KQ4 1090 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 KIF13AQ9H1H9 1805 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 ARPP19P56211 112 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 SARM1Q6SZW1 724 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 HEXIM2Q96MH2 286 aaKnown RBP15.01□□□□□ -0.01
CTR9-201ENST00000361367 RIT2Q99578 217 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 GCOM2Q9BZD3 368 aaPredicted RBP15.01□□□□□ -0.01
CTR9-201ENST00000361367 DNAJC12Q9UKB3 198 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.01□□□□□ -0.01
CTR9-201ENST00000361367 PPP2R3BQ9Y5P8 575 aa15.01□□□□□ -0.01
CTR9-201ENST00000361367 MAFGO15525 162 aa15□□□□□ -0.01
CTR9-201ENST00000361367 DNAJC24Q6P3W2 148 aa15□□□□□ -0.01
CTR9-201ENST00000361367 RNF149Q8NC42 400 aa15□□□□□ -0.01
CTR9-201ENST00000361367 MYRIPQ8NFW9 859 aa15□□□□□ -0.01
CTR9-201ENST00000361367 GABPB2Q8TAK5 448 aaPredicted RBP15□□□□□ -0.01
CTR9-201ENST00000361367 PANX2Q96RD6 677 aa15□□□□□ -0.01
CTR9-201ENST00000361367 INPP5FQ9Y2H2 1132 aa15□□□□□ -0.01
CTR9-201ENST00000361367 ZNF500O60304 480 aaPredicted RBP15□□□□□ -0.01
CTR9-201ENST00000361367 NDUFA10O95299 355 aa15□□□□□ -0.01
CTR9-201ENST00000361367 NAA35Q5VZE5 725 aa15□□□□□ -0.01
CTR9-201ENST00000361367 OR6B3Q8NGW1 331 aa15□□□□□ -0.01
CTR9-201ENST00000361367 GMCL1Q96IK5 515 aa15□□□□□ -0.01
CTR9-201ENST00000361367 BPIFA3Q9BQP9 254 aa15□□□□□ -0.01
CTR9-201ENST00000361367 MRPL47Q9HD33 250 aaKnown RBP15□□□□□ -0.01
CTR9-201ENST00000361367 NKIRAS1Q9NYS0 192 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms